Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06291 and RBAM_038140

See DNA alignment / Visit BSNT_06291 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:44
# Commandline: needle
#    -asequence pep-align/BSNT_06291___spoIIIJ.1.9828.seq
#    -bsequence pep-align/RBAM_038140___spoIIIJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06291___spoIIIJ-RBAM_038140___spoIIIJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06291___spoIIIJ-RBAM_038140___spoIIIJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06291___spoIIIJ
# 2: RBAM_038140___spoIIIJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     241/260 (92.7%)
# Similarity:   252/260 (96.9%)
# Gaps:           1/260 ( 0.4%)
# Score: 1246.0
# 
#
#=======================================

BSNT_06291___      1 MLKRRIGLLLSMVGVFMLLAGCSSVKEPITADSPHFWDKYVVYPLSELIT     50
                      :||||.|||||||:.:||||||||||||||:|||||||||||||||:||
RBAM_038140__      1 -MKRRIWLLLSMVGMLVLLAGCSSVKEPITANSPHFWDKYVVYPLSEVIT     49

BSNT_06291___     51 YVAKLTGDNYGLSIILVTILIRLLILPLMIKQLRSSKAMQALQPEMQKLK    100
                     |||||||||||||||:|||||||||||||||||||||||||||||||||:
RBAM_038140__     50 YVAKLTGDNYGLSIIIVTILIRLLILPLMIKQLRSSKAMQALQPEMQKLR     99

BSNT_06291___    101 EKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPILIQMPILIGFYHAI    150
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
RBAM_038140__    100 EKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPILIQMPILIGFYHAI    149

BSNT_06291___    151 MRTQAISEHSFLWFDLGEKDPYYILPIVAGVATFVQQKLMMAGNAQQNPQ    200
                     |||||||:||||||||||||||||||||||||||||||||||||..||||
RBAM_038140__    150 MRTQAISQHSFLWFDLGEKDPYYILPIVAGVATFVQQKLMMAGNPTQNPQ    199

BSNT_06291___    201 MAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMIAQTFLIKGPDIKKNP    250
                     ||||:|||||||||||||||:||||||||||||||||||||||||||.:|
RBAM_038140__    200 MAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMIAQTFLIKGPDIKHDP    249

BSNT_06291___    251 EPQKAGGKKK    260
                     |.||||||||
RBAM_038140__    250 ETQKAGGKKK    259


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