Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06286 and RBAM_038100

See DNA alignment / Visit BSNT_06286 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:44
# Commandline: needle
#    -asequence pep-align/BSNT_06286___gidB.1.9828.seq
#    -bsequence pep-align/RBAM_038100___gidB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06286___gidB-RBAM_038100___gidB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06286___gidB-RBAM_038100___gidB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06286___gidB
# 2: RBAM_038100___gidB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     202/239 (84.5%)
# Similarity:   223/239 (93.3%)
# Gaps:           0/239 ( 0.0%)
# Score: 1062.0
# 
#
#=======================================

BSNT_06286___      1 MNIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEV     50
                     ||||||.|.|||||||||.||||||||||.||||||||:|||||||||:|
RBAM_038100__      1 MNIEEFISSLAEKGISLSDRQLEQFELYYRMLVEWNEKMNLTSITEKKDV     50

BSNT_06286___     51 YLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHLNVTIVD    100
                     ||||||||||||||:||.:|.|:|||||||||||||||||||||:|||||
RBAM_038100__     51 YLKHFYDSITAAFYIDFEKVTTLCDVGAGAGFPSLPIKICFPHLHVTIVD    100

BSNT_06286___    101 SLNKRITFLEKLSEALQLENTTYCHDRAETFGQRKDVRESYDIVTARAVA    150
                     ||||||||||.||:|||||:|::.||||||||||||||||:|:|||||||
RBAM_038100__    101 SLNKRITFLETLSDALQLEHTSFVHDRAETFGQRKDVRESFDLVTARAVA    150

BSNT_06286___    151 RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHS    200
                     ||||||||||||.||||:|.|||||:|:|||.||:|||..||||||.:||
RBAM_038100__    151 RLSVLSELCLPLAKKNGVFAALKAAAADEELKAGQKAIKVLGGELEQVHS    200

BSNT_06286___    201 FKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPIEG    239
                     |.||:|||:||||:|||.|:|||||||||||||||||||
RBAM_038100__    201 FTLPVEESERNIMIIRKTKSTPKKYPRKPGTPNKSPIEG    239


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