Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06286 and RBAM_038100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:44
# Commandline: needle
# -asequence dna-align/BSNT_06286___gidB.1.9828.seq
# -bsequence dna-align/RBAM_038100___gidB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06286___gidB-RBAM_038100___gidB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06286___gidB-RBAM_038100___gidB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06286___gidB
# 2: RBAM_038100___gidB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity: 562/723 (77.7%)
# Similarity: 562/723 (77.7%)
# Gaps: 6/723 ( 0.8%)
# Score: 2149.0
#
#
#=======================================
BSNT_06286___ 1 ATGAATATTGAAGAATTTACTTCTGGTTTGGCGGAAAAAGGGATCTCCCT 50
||||||||.||.|||||||..||..||||.|||||.||||||||.|||||
RBAM_038100__ 1 ATGAATATAGAGGAATTTATATCCAGTTTAGCGGAGAAAGGGATTTCCCT 50
BSNT_06286___ 51 TTCTCCCCGTCAGCTAGAGCAATTTGAGCTGTATTACGACATGCTGGTTG 100
||||..|||.|||||.||||||||.|||.||||||||...|||||.||.|
RBAM_038100__ 51 TTCTGACCGCCAGCTGGAGCAATTCGAGTTGTATTACCGGATGCTCGTGG 100
BSNT_06286___ 101 AATGGAACGAAAAAATCAATCTGACTTCAATAACAGAGAAAAAAGAAGTG 150
||||||||||||||||.||||||||.||.||.||.||||||||.||.||.
RBAM_038100__ 101 AATGGAACGAAAAAATGAATCTGACATCCATCACTGAGAAAAAGGATGTT 150
BSNT_06286___ 151 TATTTAAAGCATTTTTATGATTCCATTACAGCTGCTTTTTATGTCGACTT 200
|||.|.|||||||||||||||||.||.||.||.||.||||||.|.||.||
RBAM_038100__ 151 TATCTCAAGCATTTTTATGATTCGATAACGGCGGCATTTTATATTGATTT 200
BSNT_06286___ 201 CAATCAGGTGAACACGATTTGTGATGTCGGAGCGGGAGCGGGTTTTCCAA 250
..|..||||.|.|||..|||||||||||||.||.||.||.||||||||||
RBAM_038100__ 201 TGAAAAGGTCACCACTCTTTGTGATGTCGGCGCCGGCGCCGGTTTTCCAA 250
BSNT_06286___ 251 GTCTGCCGATAAAAATATGCTTTCCGCACCTCAATGTCACAATCGTAGAT 300
|.|||||.||.|||||.|||||.|||||.||..|||||||.|||||.|||
RBAM_038100__ 251 GCCTGCCCATCAAAATCTGCTTCCCGCATCTGCATGTCACCATCGTCGAT 300
BSNT_06286___ 301 TCACTGAATAAACGGATCACGTTTTTAGAAAAGCTATCTGAGGCTTTGCA 350
|||||||||||.|||||.||||||||.||||..||.|||||.|||||.||
RBAM_038100__ 301 TCACTGAATAAGCGGATTACGTTTTTGGAAACTCTCTCTGATGCTTTACA 350
BSNT_06286___ 351 ATTGGAGAATACAACATACTG-CCATGACAGAGCTGAAACGTTCGGGCAA 399
|||.|||.||||..||| .|| ||||||||||||.||.||.|||||.||.
RBAM_038100__ 351 ATTAGAGCATACGTCAT-TTGTCCATGACAGAGCGGAGACATTCGGACAG 399
BSNT_06286___ 400 CGGAAAGACGTGCGTGAAAGCTATGATATTGTGACAGCGCGAGCAGTTGC 449
|||||||||||.||.|||||||..|||.|.|||||.||.||.||.||.||
RBAM_038100__ 400 CGGAAAGACGTACGGGAAAGCTTCGATCTCGTGACGGCCCGTGCGGTGGC 449
BSNT_06286___ 450 GAGATTATCTGTTTTGAGTGAGCTTTGCTTGCCTCTGGTGAAGAAAAACG 499
|.|..|.||.||..|||||||||||||..||||.||||..||||||||||
RBAM_038100__ 450 GCGTCTGTCGGTCCTGAGTGAGCTTTGTCTGCCGCTGGCCAAGAAAAACG 499
BSNT_06286___ 500 GTTTATTTGTTGCTTTAAAAGCCGCATCAGCGGAAGAAGAACTGAATGCA 549
|..||||||..||..||||.||.|||.||||.||.|||||.|||||.||.
RBAM_038100__ 500 GCGTATTTGCCGCACTAAAGGCAGCAGCAGCTGATGAAGAGCTGAAAGCG 549
BSNT_06286___ 550 GGCAAAAAAGCAATCACGACG--CTTGGAGGAGAACTTGAGAATATCCAT 597
||..||||.||.||.| |.| .|.||||||||.|||||..|..|.|||
RBAM_038100__ 550 GGGCAAAAGGCGATTA--AAGTATTGGGAGGAGAGCTTGAACAAGTTCAT 597
BSNT_06286___ 598 TCTTTTAAGCTGCCTATTGAAGAAAGCGATCGTAATATTATGGTGATACG 647
||.||||..||.||..||||||||||.||.||.||.||.|||.|.||.||
RBAM_038100__ 598 TCCTTTACACTTCCAGTTGAAGAAAGTGAACGGAACATCATGATCATTCG 647
BSNT_06286___ 648 CAAAATAAAAAATACACCTAAGAAGTATCCAAGAAAACCGGGAACTCCTA 697
|||.|..||||..||.||.||.||.|||||.|||||||||||.|||||.|
RBAM_038100__ 648 CAAGACGAAAAGCACTCCGAAAAAATATCCGAGAAAACCGGGTACTCCAA 697
BSNT_06286___ 698 ATAAATCGCCAATTGAAGGGTAA 720
|||||||||||||||||||||||
RBAM_038100__ 698 ATAAATCGCCAATTGAAGGGTAA 720
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