Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06281 and RBAM_038080

See DNA alignment / Visit BSNT_06281 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:44
# Commandline: needle
#    -asequence pep-align/BSNT_06281___soj.1.9828.seq
#    -bsequence pep-align/RBAM_038080___soj.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06281___soj-RBAM_038080___soj.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06281___soj-RBAM_038080___soj.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06281___soj
# 2: RBAM_038080___soj
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     244/253 (96.4%)
# Similarity:   250/253 (98.8%)
# Gaps:           0/253 ( 0.0%)
# Score: 1228.0
# 
#
#=======================================

BSNT_06281___      1 MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGLG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_038080__      1 MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGLG     50

BSNT_06281___     51 IEKADVEQCVYDILVDDADVIDIIKATTVENLDVIPATIQLAGAEIELVP    100
                     ||||||:.||||||||||||.||||.|:||||||||||||||||||||||
RBAM_038080__     51 IEKADVDHCVYDILVDDADVTDIIKPTSVENLDVIPATIQLAGAEIELVP    100

BSNT_06281___    101 TISREVRLKRALEAVKQNYDYIIIDCPPSLGLLTINALTASDSVVIPVQC    150
                     |||||||||||||:|||||||:||||||||||||||||||||||||||||
RBAM_038080__    101 TISREVRLKRALESVKQNYDYMIIDCPPSLGLLTINALTASDSVVIPVQC    150

BSNT_06281___    151 EYYALEGLSQLLNTVRLVQKHLNTDLMIEGVLLTMLDARTNLGIQVIEEV    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_038080__    151 EYYALEGLSQLLNTVRLVQKHLNTDLMIEGVLLTMLDARTNLGIQVIEEV    200

BSNT_06281___    201 KKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAEVYLDLAKEVA    250
                     |||||||||:|:||||||||||||||||||||||||||||||||||||||
RBAM_038080__    201 KKYFRDKVYQTIIPRNVRLSEAPSHGKPIILYDPRSRGAEVYLDLAKEVA    250

BSNT_06281___    251 ANG    253
                     |||
RBAM_038080__    251 ANG    253


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