Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06278 and RBAM_038060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:43
# Commandline: needle
# -asequence pep-align/BSNT_06278___yyaC.1.9828.seq
# -bsequence pep-align/RBAM_038060___yyaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06278___yyaC-RBAM_038060___yyaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06278___yyaC-RBAM_038060___yyaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06278___yyaC
# 2: RBAM_038060___yyaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 171/205 (83.4%)
# Similarity: 188/205 (91.7%)
# Gaps: 1/205 ( 0.5%)
# Score: 884.0
#
#
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BSNT_06278___ 1 MNRKGGLFSSQERVKQYVSHTDAAAAKQIQTILSSSLRKAAGKPIVVVCI 50
|||||||| ||||.||||||||::||.|||.||:||||||||:|:|.|||
RBAM_038060__ 1 MNRKGGLF-SQERAKQYVSHTDSSAANQIQAILTSSLRKAAGRPLVTVCI 49
BSNT_06278___ 51 GTDRSTGDSLGPLVGMKLKQMQLTRFHVYGTLSDPVHAVNMKDKINDIHK 100
|||||||||||||||.||::|.|.|.||||||||||||||||||:.||..
RBAM_038060__ 50 GTDRSTGDSLGPLVGTKLEKMNLGRLHVYGTLSDPVHAVNMKDKLKDIQH 99
BSNT_06278___ 101 LHKNPFVIAVDACLGRVKSVGSFQIGDGPLKPGAGVQKDLPEVGDLHING 150
||||||:|||||||||||||||||||||||||||||||||||:||:||||
RBAM_038060__ 100 LHKNPFIIAVDACLGRVKSVGSFQIGDGPLKPGAGVQKDLPEIGDVHING 149
BSNT_06278___ 151 IVNVSGFMEYFVLQNTRLNLVMNMANVLAEGLSLTDRTEWRQERLNPLQR 200
||||||||||||||||||:|||:|||||||||.|||::|.|||||:|..:
RBAM_038060__ 150 IVNVSGFMEYFVLQNTRLHLVMSMANVLAEGLQLTDKSEGRQERLSPFHK 199
BSNT_06278___ 201 LTGRI 205
||.||
RBAM_038060__ 200 LTRRI 204
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