Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06278 and RBAM_038060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:43
# Commandline: needle
# -asequence dna-align/BSNT_06278___yyaC.1.9828.seq
# -bsequence dna-align/RBAM_038060___yyaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06278___yyaC-RBAM_038060___yyaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06278___yyaC-RBAM_038060___yyaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06278___yyaC
# 2: RBAM_038060___yyaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 626
# Identity: 471/626 (75.2%)
# Similarity: 471/626 (75.2%)
# Gaps: 19/626 ( 3.0%)
# Score: 1716.0
#
#
#=======================================
BSNT_06278___ 1 ATGAATCGAAAAGGCGGGCTTTTTTCCTCTCAGGAACGAGTAAAGCAATA 50
|||||||||||||||||||||||| |||||.|||||.|.|||.|||||
RBAM_038060__ 1 ATGAATCGAAAAGGCGGGCTTTTT---TCTCAAGAACGGGCAAAACAATA 47
BSNT_06278___ 51 TGTTTCACATACAGATGCTGCAGCGGCAAAACAAATCCAAACCATCCTTT 100
|||.||.|||||.|||.||.|.||.||.||.|||||.|||.|.||||||.
RBAM_038060__ 48 TGTATCTCATACGGATTCTTCTGCTGCGAATCAAATACAAGCGATCCTTA 97
BSNT_06278___ 101 CTTCATCCTTACGTAAAGCTGCCGGCAAACCAATTGTCGTGGTTTGTATC 150
|||||||.|||||||||||.|||||||.|||..|.|||...||.||||||
RBAM_038060__ 98 CTTCATCTTTACGTAAAGCAGCCGGCAGACCGTTAGTCACCGTGTGTATC 147
BSNT_06278___ 151 GGAACAGACCGTTCAACCGGTGACTCATTAGGCCCGCTCGTAGGGATGAA 200
||.|||||.||.||.|||||.||.||||||||.||||||||| |||..||
RBAM_038060__ 148 GGCACAGATCGGTCGACCGGAGATTCATTAGGTCCGCTCGTA-GGAACAA 196
BSNT_06278___ 201 ACTCA-AACAGATGCAGCTCACCAGATTCCATGTCTACGGAACCTTATCT 249
|.|.| ||.|.|||.|..|...||||||.||.||.|||||.||..|.||.
RBAM_038060__ 197 AGTTAGAAAAAATGAATTTAGGCAGATTGCACGTTTACGGCACGCTGTCA 246
BSNT_06278___ 250 GACCCCGTCCATGCTGTGAACATGAAGGATAAAATCAATGACATTCATAA 299
||.||.||.||.||.||.||.|||||.||.||..|.||.||.||||| |.
RBAM_038060__ 247 GATCCTGTTCACGCCGTCAATATGAAAGACAAGCTGAAAGATATTCA-AC 295
BSNT_06278___ 300 AT-TACATAAAAACCCATTTGTTATAGCGGTGGATGCATGCTTAGGCCGC 348
|| ||||||||||.||.|||.||||||||||.|||||.||.|||||||||
RBAM_038060__ 296 ATCTACATAAAAATCCGTTTATTATAGCGGTTGATGCTTGTTTAGGCCGC 345
BSNT_06278___ 349 GTTAAGAGTGTGGGTTCATTTCAAATCGGGGACGGGCCATTAAAGCCCGG 398
||.||.||.||.||.||||||||||||||.||.|||||..|.||||||||
RBAM_038060__ 346 GTCAAAAGCGTAGGGTCATTTCAAATCGGCGATGGGCCGCTGAAGCCCGG 395
BSNT_06278___ 399 AGCCGGTGTGCAAAAAGACCTTCCTGAAGTGGGAGATCTTCATATTAACG 448
|||.|||||.||||||||.|||||||||.|.||.||..|.|||||.||.|
RBAM_038060__ 396 AGCAGGTGTTCAAAAAGATCTTCCTGAAATCGGTGACGTCCATATCAATG 445
BSNT_06278___ 449 GAATCGTAAATGTCAGCGGTTTTATGGAATATTTTGTATTACAAAATACT 498
|||||||.|||||||||||.||||||||.||||||||..|.||.|||||.
RBAM_038060__ 446 GAATCGTCAATGTCAGCGGGTTTATGGAGTATTTTGTCCTGCAGAATACG 495
BSNT_06278___ 499 AGAC-TCAACTTGGTCATGAATATGGCAAATGTTCTAGCGGAAGGTTTGA 547
||.| |||.||| ||.||||..||||||||||||.||||.||.||
RBAM_038060__ 496 AGGCTTCATCTT-GTTATGAGCATGGCAAATGTTTTAGCAGAGGG----- 539
BSNT_06278___ 548 GTT-----TAACAGATCGGACAGAGTGGAGGCAAGAACGCCTTAACCCGC 592
||| |.||||||....||||..|..||||.|||||.||.|..|||.
RBAM_038060__ 540 GTTACAGCTGACAGATAAATCAGAAGGCCGGCAGGAACGGCTCAGTCCGT 589
BSNT_06278___ 593 TGCAAAGGCTCACTGGGCGCATATAA 618
|.||.|.|.|.||..|.||.||||||
RBAM_038060__ 590 TTCATAAGTTGACAAGACGTATATAA 615
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