Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06277 and RBAM_038040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:43
# Commandline: needle
# -asequence pep-align/BSNT_06277___yyaD.1.9828.seq
# -bsequence pep-align/RBAM_038040___yyaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06277___yyaD-RBAM_038040___yyaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06277___yyaD-RBAM_038040___yyaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06277___yyaD
# 2: RBAM_038040___yyaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 273/340 (80.3%)
# Similarity: 308/340 (90.6%)
# Gaps: 8/340 ( 2.4%)
# Score: 1444.0
#
#
#=======================================
BSNT_06277___ 1 MLWRAGMKWMLLILGSLIGAGYASGQEIWQFFGAESGLAIVLFTIMFIFS 50
||||||||.|.||||||||||||||||.||||||||||:||..|
RBAM_038040__ 1 ------MKWMLLILSSQIGAGYASGQEIWQFFGVESGLAIVLFTVMFTIS 44
BSNT_06277___ 51 SYIVMKISFKVQSTHFLPVLEHLMGPWLAKIYDVLIIFYLFSTTMVMIAG 100
:|||:|||::||||||||||||||||.|||:|||||:|||||.|||||||
RBAM_038040__ 45 AYIVLKISYRVQSTHFLPVLEHLMGPALAKVYDVLIMFYLFSMTMVMIAG 94
BSNT_06277___ 101 GGVTLQMYKLPFWWGITLICIVTVCLFLWDVKGILSINSILIPVLVAGLL 150
|||||||||||||.||.|:|||||.||.||:|||||:||||||:||||||
RBAM_038040__ 95 GGVTLQMYKLPFWIGIFLLCIVTVGLFFWDIKGILSLNSILIPILVAGLL 144
BSNT_06277___ 151 YALISFQSTHHHTWTIDLSQQYNWPASITFTSLNILSVVAILSSVGKEMK 200
|||:.||:|||:||||||::||||||||||||||||||||:|||:||:||
RBAM_038040__ 145 YALVFFQTTHHYTWTIDLTRQYNWPASITFTSLNILSVVAVLSSIGKDMK 194
BSNT_06277___ 201 GLGEAKIASVASGLIFGVISFVYNETLVELAGSLSQFEIPLFAVLEGAPY 250
|||||||||||||||||:||||||||||:|:|||:|:|||||||||||||
RBAM_038040__ 195 GLGEAKIASVASGLIFGMISFVYNETLVQLSGSLTQYEIPLFAVLEGAPY 244
BSNT_06277___ 251 FLFLCMTAVLCLAIYTTTVAGLLGLSSRLMAFIHMPRWMIVLILLVLMVP 300
.|||||.|||.||||||||.||.|||||::||:.:|||.:|.:||.:|||
RBAM_038040__ 245 PLFLCMAAVLFLAIYTTTVTGLFGLSSRMLAFVKLPRWTLVSLLLAVMVP 294
BSNT_06277___ 301 FTSFGFSDLIAFLYPIYGMLNLYLLVCLLLYPILSKWK-- 338
||:.|||||||.||||||:|:|||||||||||||.:||
RBAM_038040__ 295 FTTIGFSDLIAILYPIYGLLSLYLLVCLLLYPILGRWKKV 334
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