Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00352 and RBAM_037960

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence pep-align/BSNT_00352___adaB.1.9828.seq
#    -bsequence pep-align/RBAM_037960___adaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00352___adaB-RBAM_037960___adaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00352___adaB-RBAM_037960___adaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00352___adaB
# 2: RBAM_037960___adaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity:     105/187 (56.1%)
# Similarity:   127/187 (67.9%)
# Gaps:          10/187 ( 5.3%)
# Score: 535.5
# 
#
#=======================================

BSNT_00352___      1 METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFEWAKKRF     50
                      .:.:|.:||:|....||:.|.|:|.|||.|:||.:...|||.:||||..
RBAM_037960__      1 -MSKEPMIYWTLFTRNDWSLYTAATSKGLCFIGSNHGSFEELEQWAKKSL     49

BSNT_00352___     51 PGSLLVEDDDKLEPYAVEITQYLEGKRKNFTVPVEYAGTQFQLAVWNALC    100
                     |...|..||:||.||.||:::|:|..|..|:||::..||:||||||.||.
RBAM_037960__     50 PQYRLARDDEKLAPYTVELSEYIENGRSAFSVPLDLYGTEFQLAVWKALM     99

BSNT_00352___    101 EIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGS    150
                     :||||:|.||||||..|.|||||||||||||.|||||||||||||||||.
RBAM_037960__    100 DIPYGETYSYSDIAKMIQKPAAVRAVGAAIGKNPVLITVPCHRVIGKNGK    149

BSNT_00352___    151 LTGYRGGFEMKTLLL--------DLEKRASSEMDVPH    179
                     |||:|||.|||..||        .||.|.|....:. 
RBAM_037960__    150 LTGFRGGLEMKKQLLALEGGNIETLEYRLSRTGGIT-    185


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