Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06267 and RBAM_037950

See DNA alignment / Visit BSNT_06267 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:43
# Commandline: needle
#    -asequence pep-align/BSNT_06267___exoA.1.9828.seq
#    -bsequence pep-align/RBAM_037950___exoA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06267___exoA-RBAM_037950___exoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06267___exoA-RBAM_037950___exoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06267___exoA
# 2: RBAM_037950___exoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     184/252 (73.0%)
# Similarity:   224/252 (88.9%)
# Gaps:           0/252 ( 0.0%)
# Score: 1057.0
# 
#
#=======================================

BSNT_06267___      1 MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDLQPEG     50
                     |||||||||||||||:|:|..:|::|..|||:||||||:|||||.|||||
RBAM_037950__      1 MKLISWNVNGLRAVMKKIDINTYVQETAADILCLQETKVQDGQVSLQPEG     50

BSNT_06267___     51 YHVYWNYAVKKGYSGTAVFSKQEPLQVIYGIGLEEHDQEGRVITLEFENV    100
                     ||.||||||||||||||||||::||.|:||:|:::|||||||||||||:|
RBAM_037950__     51 YHAYWNYAVKKGYSGTAVFSKEKPLHVLYGLGIDDHDQEGRVITLEFEHV    100

BSNT_06267___    101 FVITVYTPNSRRGLERIDYRMQWEEALLSYILELDQKKPVILCGDLNVAH    150
                     ||:..||||::|||||||||:|||.....|:.:||:||||||||||||||
RBAM_037950__    101 FVVNCYTPNAKRGLERIDYRLQWEADFKDYLQKLDRKKPVILCGDLNVAH    150

BSNT_06267___    151 QEIDLKNPKANRNNAGFSDQEREAFTRFLEAGFVDSFRHVYPDLEGAYSW    200
                     :|||||||||||.|||||:||||||:..|.|||.||||::|||.||||||
RBAM_037950__    151 REIDLKNPKANRKNAGFSEQEREAFSALLNAGFTDSFRYLYPDQEGAYSW    200

BSNT_06267___    201 WSYRAGARDRNIGWRIDYFVVSERLKEQIEDASISADVMGSDHCPVELII    250
                     ||||..||::|||||:||.:||:|||::|..|:|.||:|||||||||:.:
RBAM_037950__    201 WSYRTNAREKNIGWRLDYVIVSDRLKQRISQAAICADIMGSDHCPVEMTV    250

BSNT_06267___    251 NI    252
                     ::
RBAM_037950__    251 DL    252


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