Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06259 and RBAM_037920
See
DNA alignment /
Visit
BSNT_06259 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:42
# Commandline: needle
# -asequence pep-align/BSNT_06259___yyaJ.1.9828.seq
# -bsequence pep-align/RBAM_037920___yyaJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06259___yyaJ-RBAM_037920___yyaJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06259___yyaJ-RBAM_037920___yyaJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06259___yyaJ
# 2: RBAM_037920___yyaJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 381/451 (84.5%)
# Similarity: 409/451 (90.7%)
# Gaps: 8/451 ( 1.8%)
# Score: 2011.0
#
#
#=======================================
BSNT_06259___ 1 MNTIFKQKNTHPFSNAANRLDRLPISRVHFQVLTALGIVYFFDLADLFTL 50
.....|||.|||||||||||||:||||||||:|||||||||||
RBAM_037920__ 1 -------MKHQTFSNVANRLDRLPISRVHYQVLTALGIIYFFDLADLFTL 43
BSNT_06259___ 51 SNVAPALIEHWGIPLSTIANVTAASFLGMFLGASLGGRLSDRIGRKKALN 100
||||||||||||:.|||||::|||||||||||||:|||||||||||||||
RBAM_037920__ 44 SNVAPALIEHWGVKLSTIADITAASFLGMFLGASIGGRLSDRIGRKKALN 93
BSNT_06259___ 101 LFVFVFSIASLCNAAAWDIPSLMTFRFLTGFGVAAAMVITNSYLAEFFPS 150
.||.||||:|..||.||||||||.||||||.||||||::|||||||||||
RBAM_037920__ 94 CFVLVFSISSFLNALAWDIPSLMIFRFLTGLGVAAAMIVTNSYLAEFFPS 143
BSNT_06259___ 151 SVRGKYISFCAMIGLIGVPITNIVSAFVIPLGSWGWRLVFVWGAVGLIYF 200
||||||||.||||||||||:||:|||||||||||||||||||||.|||||
RBAM_037920__ 144 SVRGKYISLCAMIGLIGVPVTNVVSAFVIPLGSWGWRLVFVWGAAGLIYF 193
BSNT_06259___ 201 FFIRRLEESPRWHENRGEYAKADAILNRIEAQVEKEKGPLPAASQPKVSE 250
|||||||||||||||||.|.:|:||:||:||:.|||||||||..:.....
RBAM_037920__ 194 FFIRRLEESPRWHENRGAYDQANAIMNRLEARAEKEKGPLPAPKEAAEVH 243
BSNT_06259___ 251 TVKQHAGYAGLLKGRNLKITIVLSAVWIFETFGFYGFASWVPSLLKSNGV 300
||| ||||.||.:||||||||:||||||.||||||||||||||||||||:
RBAM_037920__ 244 TVK-HAGYLGLFQGRNLKITIILSAVWILETFGFYGFASWVPSLLKSNGI 292
BSNT_06259___ 301 TMENTLWYNVLHSVGAPLGALLGSMISERFQRKWILAASAFLTAIAGLLY 350
|||.||||||||||||||||||||||||.|||||||||||||||||||||
RBAM_037920__ 293 TMEKTLWYNVLHSVGAPLGALLGSMISETFQRKWILAASAFLTAIAGLLY 342
BSNT_06259___ 351 GMTFIPIMIIVFGFIVNITERVFTSNLYAYTSEPYPTEYRSSGSGLAYGL 400
||||||:|||||||:||:|||:|||||||||||||||||||:||||||||
RBAM_037920__ 343 GMTFIPLMIIVFGFVVNVTERIFTSNLYAYTSEPYPTEYRSAGSGLAYGL 392
BSNT_06259___ 401 GRFSNIFGSLLVGFIAVQLGYISVFLFIGGCWLACSLLLIFFGPNTNAKQ 450
|||||||||||||||||:|||||||||||||||.||:|||.|||.|||:|
RBAM_037920__ 393 GRFSNIFGSLLVGFIAVKLGYISVFLFIGGCWLLCSVLLILFGPKTNAQQ 442
BSNT_06259___ 451 I 451
|
RBAM_037920__ 443 I 443
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.