Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06258 and RBAM_037910

See DNA alignment / Visit BSNT_06258 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:42
# Commandline: needle
#    -asequence pep-align/BSNT_06258___yyaK.1.9828.seq
#    -bsequence pep-align/RBAM_037910___yyaK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06258___yyaK-RBAM_037910___yyaK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06258___yyaK-RBAM_037910___yyaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06258___yyaK
# 2: RBAM_037910___yyaK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     172/308 (55.8%)
# Similarity:   226/308 (73.4%)
# Gaps:          11/308 ( 3.6%)
# Score: 942.5
# 
#
#=======================================

BSNT_06258___      1 MKGRDIEGMNSFIRPIEGNNTLWRYFFAFLVMVGLYVFGNIAYLFAILFT     50
                             ||:|:||.||.|::.||..:.||:|||:.||:|..:|.:..|
RBAM_037910__      1 --------MNTFVRPAEGKNSVSRYLLSLLVIVGLFFFGSILTVFYMFLT     42

BSNT_06258___     51 VIVNPNITFDLDEAVLSDPLVDLYLSHVIYLFAIPGVWLAVRFILKRPFR    100
                     ...||::|.:.||..|||||.|:||.|::|..||||:|:|||||:||.|.
RBAM_037910__     43 SAFNPSLTINWDEGALSDPLADIYLQHIVYFIAIPGIWIAVRFIMKRRFL     92

BSNT_06258___    101 TVITPNSKMNWRRISFGFIAYFLLMIAVQLIDFAIHPDSYSMQEFNASRF    150
                     ::||||..:||:||.|||..|.:||....||||.||||.:.:|||:||||
RBAM_037910__     93 SIITPNQSLNWKRIFFGFGTYVVLMFVAGLIDFTIHPDRFMLQEFHASRF    142

BSNT_06258___    151 IWLLAAALILVPIQTSAEELFFRGFLLQAFGRLTKNPLFLTLIVGGLFGV    200
                     :.|||||::||||||||||..|||||||..|:||.|...||:|:|||||.
RBAM_037910__    143 LLLLAAAVLLVPIQTSAEEFLFRGFLLQFAGKLTANAAVLTVIIGGLFGA    192

BSNT_06258___    201 LHFANPEMNNGAVWAGIEYLTFGFVWTYYTIKTGSIEISLGAHAANNMFL    250
                     |||.||||:|||:||||.|:|.|.:||:.||||||:|:|||.||||||||
RBAM_037910__    193 LHFGNPEMDNGALWAGIGYITIGMIWTFITIKTGSLEMSLGGHAANNMFL    242

BSNT_06258___    251 CMFITEKNSVYGGIPSLFTVTRGN-PMWEAFFTIAVNLVFAGIALWYHKK    299
                     .:|:||.:||||||||:||...|. .:::...|:.:|::||.:|..:.| 
RBAM_037910__    243 FIFLTEDHSVYGGIPSIFTTAAGGYEIYDCISTLVINIIFAWLAFRFVK-    291

BSNT_06258___    300 SKSKQQGS    307
                      |.|||.:
RBAM_037910__    292 -KEKQQAA    298


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