Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06256 and RBAM_037900

See DNA alignment / Visit BSNT_06256 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:42
# Commandline: needle
#    -asequence pep-align/BSNT_06256___yyaL.1.9828.seq
#    -bsequence pep-align/RBAM_037900___yyaL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06256___yyaL-RBAM_037900___yyaL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06256___yyaL-RBAM_037900___yyaL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06256___yyaL
# 2: RBAM_037900___yyaL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity:     473/690 (68.6%)
# Similarity:   546/690 (79.1%)
# Gaps:          62/690 ( 9.0%)
# Score: 2528.0
# 
#
#=======================================

BSNT_06256___      0 --------------------------------------------------      0
                                                                       
RBAM_037900__      1 MPNNSKPNSLITEKSPYLLQHAHNPVNWHPWGKEAFEKAKRENKPVLVSI     50

BSNT_06256___      1 ----------MAHESFEDEEIARLLNERFVAIKVDREERPDVDSVYMRIC     40
                               ||||||||||||.:||::|:||||||||||||||||||||
RBAM_037900__     51 GYSTCHWCHVMAHESFEDEEIAGMLNDKFIAIKVDREERPDVDSVYMRIC    100

BSNT_06256___     41 QLMTGQGGWPLNVFITPDQKPFYAGTYFPKTSKFNRPGFVDVLEHLSETF     90
                     ||||||||||||||:||||||||||||||||||||||||:||||||||||
RBAM_037900__    101 QLMTGQGGWPLNVFVTPDQKPFYAGTYFPKTSKFNRPGFIDVLEHLSETF    150

BSNT_06256___     91 ANDREHVEDIAENAAKHLQTKTAAKSGEGLSESAIHRTFQQLASGFDTIY    140
                     ||||:||||||||||.||:.|.....|. |.|.|:|.|::|||.||||:|
RBAM_037900__    151 ANDRQHVEDIAENAAAHLEVKVHPTEGM-LGEQAVHDTYRQLAGGFDTVY    199

BSNT_06256___    141 GGFGQAPKFPMPHMLMYLLRYHHNTGQENALYNVTKTLDSMANGGIYDHI    190
                     ||||||||||||||||:||||:..||:|.||..||||||.||||||:|||
RBAM_037900__    200 GGFGQAPKFPMPHMLMFLLRYYSYTGKEQALAGVTKTLDGMANGGIFDHI    249

BSNT_06256___    191 GYGFARYSTDDEWLVPHFEKMLYDNALLLTAYTEAYQVTQNSRYKEICEQ    240
                     ||||||||||:||||||||||||||||||||||||||||.|.|||:|..|
RBAM_037900__    250 GYGFARYSTDNEWLVPHFEKMLYDNALLLTAYTEAYQVTGNERYKQIAMQ    299

BSNT_06256___    241 IITFIQREMTHEDGSFFSALDADTEGEEGKYYVWSKEEILKTLGDDLGTL    290
                     |:.|||||||||||||||||||||||.|||||:|||:||:..|||:||.|
RBAM_037900__    300 IVMFIQREMTHEDGSFFSALDADTEGREGKYYIWSKKEIMNLLGDELGPL    349

BSNT_06256___    291 YCQVYDITEEGNFEGKNIPNLIHTKWEQIKADAGLTEKELSLKLEEARQQ    340
                     ||:||:||::|||||:|||:||.|:.|.|..:.|||..||:.:|||||.:
RBAM_037900__    350 YCKVYNITDQGNFEGENIPHLIFTRREAILEETGLTGHELAERLEEARTK    399

BSNT_06256___    341 LLKTREERTYPHVDDKVLTSWNALMIAGLAKAAKVYQEPKYLSLAKDAIT    390
                     ||:.||.|:|||.|||||||||||||.||||||||:.||.:||:|:.||.
RBAM_037900__    400 LLEARENRSYPHTDDKVLTSWNALMITGLAKAAKVFHEPDFLSMAETAIR    449

BSNT_06256___    391 FIENKLIIDGRVMVRYRDGEVKNKGFIDDYAFLLWAYLDLYEASFDLSYL    440
                     |:|..|:.|||||||||:|||||||||||||||:||||:||||.|:.|||
RBAM_037900__    450 FLERHLMPDGRVMVRYREGEVKNKGFIDDYAFLIWAYLELYEAGFNPSYL    499

BSNT_06256___    441 QKAKKLTDDIISLFWDEEHGGFYFTGHDAEALIVREKEVYDGAVPSGNSV    490
                     ||||.|...::.|||||.||||:|||:|||.|:||||||||||||||||.
RBAM_037900__    500 QKAKTLCTSMLELFWDERHGGFFFTGNDAETLLVREKEVYDGAVPSGNSA    549

BSNT_06256___    491 AAVQLLRLGQVTGDSSLIEKAETMFSVFKPDIDAYPSGHAFFMQSVLRHL    540
                     |||||||||::|||.|||||||.||||||.:|:||||.:||||||||.|.
RBAM_037900__    550 AAVQLLRLGRLTGDISLIEKAEAMFSVFKREIEAYPSSNAFFMQSVLAHT    599

BSNT_06256___    541 MPKKEIVIFGSADDPARKQIITELQKAFKPNDSILVAEHPDQCKDIAPFA    590
                     ||:||||:||..|||.||:.|..||:.|.|..:||.||||::...|:.||
RBAM_037900__    600 MPQKEIVVFGRKDDPDRKRFIEALQEHFTPAYTILAAEHPEELAGISDFA    649

BSNT_06256___    591 ADYRIIDGKTTVYICENFACQQPTTNIEEAIHTL-ISSRD    629
                     |.|::|||:|||||||||||::|||:|:||::|| ||||.
RBAM_037900__    650 AGYQMIDGRTTVYICENFACRRPTTDIDEAMNTLQISSRA    689


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