Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06256 and RBAM_037900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:42
# Commandline: needle
# -asequence pep-align/BSNT_06256___yyaL.1.9828.seq
# -bsequence pep-align/RBAM_037900___yyaL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06256___yyaL-RBAM_037900___yyaL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06256___yyaL-RBAM_037900___yyaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06256___yyaL
# 2: RBAM_037900___yyaL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity: 473/690 (68.6%)
# Similarity: 546/690 (79.1%)
# Gaps: 62/690 ( 9.0%)
# Score: 2528.0
#
#
#=======================================
BSNT_06256___ 0 -------------------------------------------------- 0
RBAM_037900__ 1 MPNNSKPNSLITEKSPYLLQHAHNPVNWHPWGKEAFEKAKRENKPVLVSI 50
BSNT_06256___ 1 ----------MAHESFEDEEIARLLNERFVAIKVDREERPDVDSVYMRIC 40
||||||||||||.:||::|:||||||||||||||||||||
RBAM_037900__ 51 GYSTCHWCHVMAHESFEDEEIAGMLNDKFIAIKVDREERPDVDSVYMRIC 100
BSNT_06256___ 41 QLMTGQGGWPLNVFITPDQKPFYAGTYFPKTSKFNRPGFVDVLEHLSETF 90
||||||||||||||:||||||||||||||||||||||||:||||||||||
RBAM_037900__ 101 QLMTGQGGWPLNVFVTPDQKPFYAGTYFPKTSKFNRPGFIDVLEHLSETF 150
BSNT_06256___ 91 ANDREHVEDIAENAAKHLQTKTAAKSGEGLSESAIHRTFQQLASGFDTIY 140
||||:||||||||||.||:.|.....|. |.|.|:|.|::|||.||||:|
RBAM_037900__ 151 ANDRQHVEDIAENAAAHLEVKVHPTEGM-LGEQAVHDTYRQLAGGFDTVY 199
BSNT_06256___ 141 GGFGQAPKFPMPHMLMYLLRYHHNTGQENALYNVTKTLDSMANGGIYDHI 190
||||||||||||||||:||||:..||:|.||..||||||.||||||:|||
RBAM_037900__ 200 GGFGQAPKFPMPHMLMFLLRYYSYTGKEQALAGVTKTLDGMANGGIFDHI 249
BSNT_06256___ 191 GYGFARYSTDDEWLVPHFEKMLYDNALLLTAYTEAYQVTQNSRYKEICEQ 240
||||||||||:||||||||||||||||||||||||||||.|.|||:|..|
RBAM_037900__ 250 GYGFARYSTDNEWLVPHFEKMLYDNALLLTAYTEAYQVTGNERYKQIAMQ 299
BSNT_06256___ 241 IITFIQREMTHEDGSFFSALDADTEGEEGKYYVWSKEEILKTLGDDLGTL 290
|:.|||||||||||||||||||||||.|||||:|||:||:..|||:||.|
RBAM_037900__ 300 IVMFIQREMTHEDGSFFSALDADTEGREGKYYIWSKKEIMNLLGDELGPL 349
BSNT_06256___ 291 YCQVYDITEEGNFEGKNIPNLIHTKWEQIKADAGLTEKELSLKLEEARQQ 340
||:||:||::|||||:|||:||.|:.|.|..:.|||..||:.:|||||.:
RBAM_037900__ 350 YCKVYNITDQGNFEGENIPHLIFTRREAILEETGLTGHELAERLEEARTK 399
BSNT_06256___ 341 LLKTREERTYPHVDDKVLTSWNALMIAGLAKAAKVYQEPKYLSLAKDAIT 390
||:.||.|:|||.|||||||||||||.||||||||:.||.:||:|:.||.
RBAM_037900__ 400 LLEARENRSYPHTDDKVLTSWNALMITGLAKAAKVFHEPDFLSMAETAIR 449
BSNT_06256___ 391 FIENKLIIDGRVMVRYRDGEVKNKGFIDDYAFLLWAYLDLYEASFDLSYL 440
|:|..|:.|||||||||:|||||||||||||||:||||:||||.|:.|||
RBAM_037900__ 450 FLERHLMPDGRVMVRYREGEVKNKGFIDDYAFLIWAYLELYEAGFNPSYL 499
BSNT_06256___ 441 QKAKKLTDDIISLFWDEEHGGFYFTGHDAEALIVREKEVYDGAVPSGNSV 490
||||.|...::.|||||.||||:|||:|||.|:||||||||||||||||.
RBAM_037900__ 500 QKAKTLCTSMLELFWDERHGGFFFTGNDAETLLVREKEVYDGAVPSGNSA 549
BSNT_06256___ 491 AAVQLLRLGQVTGDSSLIEKAETMFSVFKPDIDAYPSGHAFFMQSVLRHL 540
|||||||||::|||.|||||||.||||||.:|:||||.:||||||||.|.
RBAM_037900__ 550 AAVQLLRLGRLTGDISLIEKAEAMFSVFKREIEAYPSSNAFFMQSVLAHT 599
BSNT_06256___ 541 MPKKEIVIFGSADDPARKQIITELQKAFKPNDSILVAEHPDQCKDIAPFA 590
||:||||:||..|||.||:.|..||:.|.|..:||.||||::...|:.||
RBAM_037900__ 600 MPQKEIVVFGRKDDPDRKRFIEALQEHFTPAYTILAAEHPEELAGISDFA 649
BSNT_06256___ 591 ADYRIIDGKTTVYICENFACQQPTTNIEEAIHTL-ISSRD 629
|.|::|||:|||||||||||::|||:|:||::|| ||||.
RBAM_037900__ 650 AGYQMIDGRTTVYICENFACRRPTTDIDEAMNTLQISSRA 689
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