Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02895 and RBAM_037880

See DNA alignment / Visit BSNT_02895 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_02895.1.9828.seq
#    -bsequence pep-align/RBAM_037880___ynaF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02895-RBAM_037880___ynaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02895-RBAM_037880___ynaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02895
# 2: RBAM_037880___ynaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 136
# Identity:      34/136 (25.0%)
# Similarity:    41/136 (30.1%)
# Gaps:          84/136 (61.8%)
# Score: 174.0
# 
#
#=======================================

BSNT_02895         0 --------------------------------------------------      0
                                                                       
RBAM_037880__      1 MRTLNTRFKRLLRLRDFEFFQVELNDDDRTAFLLFIDERSLDSEEGNNVK     50

BSNT_02895         1 ----------------------------------MDILSAKEEFDFDFPF     16
                                                       ||.|:.||||||||||
RBAM_037880__     51 IFLISHFELSDSSYQDVLSFNDDLLGMKYNCSYVMDTLTVKEEFDFDFPF    100

BSNT_02895        17 NMLAIKSYVQELIKMLGIDITLPEMKERDFDKLSQD     52
                     :||||:.|||||:..|.||..||:.||.||:.|||:
RBAM_037880__    101 DMLAIREYVQELLSTLKIDKKLPKFKETDFNYLSQE    136


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