Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02895 and RBAM_037880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_02895.1.9828.seq
# -bsequence dna-align/RBAM_037880___ynaF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02895-RBAM_037880___ynaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02895-RBAM_037880___ynaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02895
# 2: RBAM_037880___ynaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 421
# Identity: 115/421 (27.3%)
# Similarity: 115/421 (27.3%)
# Gaps: 272/421 (64.6%)
# Score: 391.0
#
#
#=======================================
BSNT_02895 0 -------------------------------------------------- 0
RBAM_037880__ 1 ATGAGAACTTTAAACACGAGATTTAAACGTTTATTGAGATTAAGAGATTT 50
BSNT_02895 0 -------------------------------------------------- 0
RBAM_037880__ 51 TGAATTCTTTCAAGTGGAATTAAACGATGATGACAGAACTGCTTTTTTGT 100
BSNT_02895 0 -------------------------------------------------- 0
RBAM_037880__ 101 TATTCATTGATGAAAGATCGCTAGATTCTGAAGAAGGTAATAATGTAAAA 150
BSNT_02895 0 -------------------------------------------------- 0
RBAM_037880__ 151 ATATTTTTAATCTCCCATTTCGAGTTATCTGATTCGTCATATCAAGATGT 200
BSNT_02895 0 -------------------------------------------------- 0
RBAM_037880__ 201 ACTAAGTTTTAATGATGATCTTTTGGGTATGAAATATAATTGTTCATATG 250
BSNT_02895 1 --ATGGATATTCTAAGCGCTAAAGAGGAATTTGATTTCGATTTCCCATTT 48
|||||.|.|.|||..|.|||||||||.|||||||||||||||||||||
RBAM_037880__ 251 TAATGGACACTTTAACTGTTAAAGAGGAGTTTGATTTCGATTTCCCATTT 300
BSNT_02895 49 AATATGCTTGCAA-TAAAAAGCTATGTACAAGAATTA---------ATAA 88
.|.|||||||||| |..|.|| |||||.|||||.||| .|||
RBAM_037880__ 301 GACATGCTTGCAATTCGAGAG-TATGTTCAAGAGTTATTGTCCACTTTAA 349
BSNT_02895 89 AAATGTTAGGGATTGATATAACTCTGCCTGAAATGAAAGAAAGAGATTTT 138
|| ||.||.|.||..||.|||.||.|.|||||||..||||||
RBAM_037880__ 350 AA---------ATCGACAAAAAACTCCCTAAATTTAAAGAAACGGATTTT 390
BSNT_02895 139 GACAAACTTTCTCAAGATTAA 159
.|..|..|.||||||||.||.
RBAM_037880__ 391 AATTATTTATCTCAAGAATAG 411
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