Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06253 and RBAM_037860

See DNA alignment / Visit BSNT_06253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:42
# Commandline: needle
#    -asequence pep-align/BSNT_06253.1.9828.seq
#    -bsequence pep-align/RBAM_037860___yyaL1.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06253-RBAM_037860___yyaL1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06253-RBAM_037860___yyaL1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06253
# 2: RBAM_037860___yyaL1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      46/61 (75.4%)
# Similarity:    50/61 (82.0%)
# Gaps:           5/61 ( 8.2%)
# Score: 270.0
# 
#
#=======================================

BSNT_06253         1 MPTNNKPNRLIAEKSPYLLQHAHNPVNWFPWGDEAFEKAKRENKPVLVSI     50
                     ||.|:|||.||.||||||||||||||.|||||:|.|:|||||||||||:|
RBAM_037860__      1 MPNNSKPNSLITEKSPYLLQHAHNPVKWFPWGEEVFQKAKRENKPVLVNI     50

BSNT_06253        51 GYSTCHWCHVS     61
                     ||.|||     
RBAM_037860__     51 GYLTCH-----     56


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.