Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06253 and RBAM_037860
See
Amino acid alignment /
Visit
BSNT_06253 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:42
# Commandline: needle
# -asequence dna-align/BSNT_06253.1.9828.seq
# -bsequence dna-align/RBAM_037860___yyaL1.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06253-RBAM_037860___yyaL1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06253-RBAM_037860___yyaL1.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06253
# 2: RBAM_037860___yyaL1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 140/186 (75.3%)
# Similarity: 140/186 (75.3%)
# Gaps: 15/186 ( 8.1%)
# Score: 576.0
#
#
#=======================================
BSNT_06253 1 ATGCCCACTAACAATAAGCCCAATAGATTAATCGCTGAGAAGTCTCCTTA 50
|||||.|.|||.|.|||.|||||.||.||||||.|.||||||||.||.||
RBAM_037860__ 1 ATGCCAAATAATAGTAAACCCAACAGTTTAATCACGGAGAAGTCCCCCTA 50
BSNT_06253 51 TTTACTTCAACATGCTCATAACCCTGTGAATTGGTTCCCTTGGGGAGATG 100
|.||||.|||||.||.||.|||||||||||.|||||||||||||||||.|
RBAM_037860__ 51 TCTACTCCAACACGCCCACAACCCTGTGAAATGGTTCCCTTGGGGAGAAG 100
BSNT_06253 101 AAGCATTTGAAAAAGCGAAACGCGAAAACAAGCCTGTTCTGGTCAGCATC 150
|||..|||.|||||||.|||||||||||||||||.|||||.||||..|||
RBAM_037860__ 101 AAGTCTTTCAAAAAGCAAAACGCGAAAACAAGCCGGTTCTTGTCAATATC 150
BSNT_06253 151 GGTTATTCGACTTGTCATTGGTGCCATGTCTCTTAA 186
||.||||.|||.|||||.|.|
RBAM_037860__ 151 GGCTATTTGACGTGTCACTAG--------------- 171
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.