Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00912 and RBAM_037780

See DNA alignment / Visit BSNT_00912 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_00912___ydeO.1.9828.seq
#    -bsequence pep-align/RBAM_037780___ydeO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00912___ydeO-RBAM_037780___ydeO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00912___ydeO-RBAM_037780___ydeO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00912___ydeO
# 2: RBAM_037780___ydeO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     264/292 (90.4%)
# Similarity:   277/292 (94.9%)
# Gaps:           2/292 ( 0.7%)
# Score: 1310.5
# 
#
#=======================================

BSNT_00912___      1 MNTTKK--HKKFKAKMIFQIIMVIIGGIIAAYGLETVLIPNSVSDGGVTG     48
                     |:|.:|  .|||:.|.|.:.||||||||||||||||||||||||||||||
RBAM_037780__      1 MSTIEKQRRKKFRVKSIVRAIMVIIGGIIAAYGLETVLIPNSVSDGGVTG     50

BSNT_00912___     49 LSIVGSQLFNLPLGILIAVINIPFVWLGYKQIGKSFALLSIIGIVSLAAG     98
                     |||||||||:||||||||||||||||||||||||.||.||||||||||||
RBAM_037780__     51 LSIVGSQLFHLPLGILIAVINIPFVWLGYKQIGKGFAFLSIIGIVSLAAG    100

BSNT_00912___     99 TSFFHHTPAIIEGDTLLITVVGGIILGFGMGLALRNGGALDGIDMLAVLL    148
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037780__    101 TSFFHHTPAIIEGDTLLITVVGGIILGFGMGLALRNGGALDGIDMLAVLL    150

BSNT_00912___    149 SRKLPFGTSDLILFLNLFVFIFVSTVFGLQGALLSVIAYYIASKVIHVVE    198
                     ||||||||||||||||:|||||||.|||||||||||||||||||||||||
RBAM_037780__    151 SRKLPFGTSDLILFLNMFVFIFVSFVFGLQGALLSVIAYYIASKVIHVVE    200

BSNT_00912___    199 EGLSGSKTFQIITTQPELMVETIRDQLGRSATYKEAYGGFSHEKFKEITC    248
                     |||||||||||||.:|.|||||||::|||||||||||||||||||:||||
RBAM_037780__    201 EGLSGSKTFQIITNEPALMVETIREELGRSATYKEAYGGFSHEKFQEITC    250

BSNT_00912___    249 VINRLEETKLKEIINDIDKSAFVTVYDVAEVKGSNFRSLNHH    290
                     |||||||||||||||||||.|||||||||||||||||.:::|
RBAM_037780__    251 VINRLEETKLKEIINDIDKQAFVTVYDVAEVKGSNFRKVHNH    292


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