Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03836 and RBAM_037740

See DNA alignment / Visit BSNT_03836 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_03836.1.9828.seq
#    -bsequence pep-align/RBAM_037740___yybE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03836-RBAM_037740___yybE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03836-RBAM_037740___yybE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03836
# 2: RBAM_037740___yybE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     122/296 (41.2%)
# Similarity:   196/296 (66.2%)
# Gaps:           0/296 ( 0.0%)
# Score: 629.0
# 
#
#=======================================

BSNT_03836         1 MEWEQLEYFQTLARIQHVTKAAETLSITQPALSRSIVRLENHLGVPLFDR     50
                     |:|.|:.||||:|::||:|:||:.|||:||||||||.:||:.|||.||||
RBAM_037740__      1 MDWHQINYFQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDR     50

BSNT_03836        51 QGRSIKLNKYGEIFLKRVDSMIREYTEGKEEIQSLLKPDQGEVSLGFLHT    100
                     :||:|.||:||::||.||:..||:...||:|:.:.:.|:.|.:.|.||.:
RBAM_037740__     51 KGRNIYLNRYGKMFLHRVEQSIRQIEIGKQEVWNEIHPNSGTILLSFLPS    100

BSNT_03836       101 LGTTIVPNLIGTFKDNYPKVQFQLNQSHSNLLLDKLKSGELDLCLLASFP    150
                     ||.::||::|.:|:..||.|.|||.|:.:..::::|.|.|:|:.|.:...
RBAM_037740__    101 LGMSMVPDVISSFQHMYPHVNFQLTQASNQQIIEQLTSREVDIALTSLRD    150

BSNT_03836       151 VESNIMWKPLWKEELFLFLPKKHVLATREDITLNEIANEPFVLMKEGFAL    200
                     ...:::.:||..|||:|.:..:|.||:.::|.|....:|||:..|:...|
RBAM_037740__    151 ENDDVICQPLLTEELYLAVSAEHPLASYDEIDLKMAEHEPFISFKDTNVL    200

BSNT_03836       201 RVTIDDIFEQVNITPNIVFEGEEATTIAGFVAAGLGVSILPDFKGLDQTN    250
                     ...|.::.|:...:|::|||||:..|.:|.|.|.||||::||....|:|.
RBAM_037740__    201 HGMIKELCEKAGFSPDVVFEGEDIVTASGLVGAKLGVSLIPDLHVFDKTK    250

BSNT_03836       251 IAKVRISWPRFERTVGLSWIKGKHLSPVTENFKQYIINQFPQIDSI    296
                     :..:.::.|..||.:||:|.|..:|||..|||..:|..:..:....
RBAM_037740__    251 VKLLSVTNPICEREIGLAWRKDGYLSPAAENFIAFIQTRLNRKGGR    296


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