Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00868 and RBAM_037710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence pep-align/BSNT_00868.1.9828.seq
# -bsequence pep-align/RBAM_037710.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00868-RBAM_037710.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00868-RBAM_037710.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00868
# 2: RBAM_037710
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity: 124/310 (40.0%)
# Similarity: 174/310 (56.1%)
# Gaps: 29/310 ( 9.4%)
# Score: 552.5
#
#
#=======================================
BSNT_00868 1 MEIRHLKTFITIVEKGGFTKAAEYLGYAQSTITSHIKDIEQEIGGPLFNR 50
||||||.||..||:||.:|.||..|||.|||||:||:.:||||||.||..
RBAM_037710 1 MEIRHLITFQAIVDKGSYTGAAAKLGYTQSTITTHIQALEQEIGGALFTY 50
BSNT_00868 51 FGKKMLLTEVGEYLLPYANEMIRISEKVKQIQSNDEPMGNLVIGAPESLT 100
..:::.||.:|..|:|.|.:::...:|:|.:||..|..|.|.|.||||||
RBAM_037710 51 EKRRLKLTPLGRELIPLAEDLLSAHDKIKNMQSIHEVKGVLKIAAPESLT 100
BSNT_00868 101 VYRLPPIIHEFKKLFPKVKITLKSSTCWELKDDLRNGKVDLAFLLEYEQE 150
:.||.|||.|:...:|.|.|.|.:.||.:.:.:|.:|:||:||::..|.:
RBAM_037710 101 ISRLGPIIREYSMKYPNVNIILSNGTCGQNQVELVSGRVDIAFMVYPEIQ 150
BSNT_00868 151 EADLYIEKLITEPMILVF---PKQHKLQNTPFDDFYFSSDEVILYTEHGC 197
........|:.|.::||. ..:| |||:..|.....:..|.||
RBAM_037710 151 MEKCIHHSLLEERIVLVAGSDAPEH------FDDYQQSGKHFFITNEEGC 194
BSNT_00868 198 SYRTYFEEYMKHQGLVSENTFEFWSVEAIKQCVMCGLGISLLPLITVQKE 247
||||.||.::....:....|.|.||:|||||.||.|||.|:||.|||::|
RBAM_037710 195 SYRTMFERFLVKYDISHLQTMELWSIEAIKQTVMSGLGFSVLPYITVKEE 244
BSNT_00868 248 LKENKLSGLIMDE--TRIITQVAYHKKRWNSLAMAEFINIV------KKH 289
:|..||..|...| .|:.:.:...||:|...|...|:::| |
RBAM_037710 245 VKAGKLKILQQSEPFERLYSHMLVKKKKWQLPAAEAFVSLVLESFGDK-- 292
BSNT_00868 290 AELWKRTQTL 299
RBAM_037710 292 ---------- 292
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