Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01919 and RBAM_037690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_01919___yjbB.1.9828.seq
# -bsequence pep-align/RBAM_037690___yfmI1.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01919___yjbB-RBAM_037690___yfmI1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01919___yjbB-RBAM_037690___yfmI1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01919___yjbB
# 2: RBAM_037690___yfmI1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 455
# Identity: 97/455 (21.3%)
# Similarity: 154/455 (33.8%)
# Gaps: 186/455 (40.9%)
# Score: 364.5
#
#
#=======================================
BSNT_01919___ 1 MITFTIRGKKRRRNTIQFLHNKNVFALLLSQSFQSLAGVLVTIVLMVRVY 50
RBAM_037690__ 0 -------------------------------------------------- 0
BSNT_01919___ 51 QMTDSVFLAGLILSFMSFASIAASFCVSPVLRILGFKKVLVGANLLRAVF 100
RBAM_037690__ 0 -------------------------------------------------- 0
BSNT_01919___ 101 TILMAYSVTHHGQAFFWITLLFVFC----FSFAGAFFQPARFALLPIIVP 146
:|| .||...:|.|.:.||:..|:|
RBAM_037690__ 1 ----------------------MFCLIGGISFCNGWFAPIKSALIGEIIP 28
BSNT_01919___ 147 KKQYVKANGVISLSNQLFLTAGWGLGGLL--------TYAVPFELIVGAA 188
..:..||||::|.::|....|||.|||:: |..|...|:|.:.
RBAM_037690__ 29 PDRRAKANGLLSAADQTVQFAGWSLGGVIIAFLGESDTMIVTVMLLVSSV 78
BSNT_01919___ 189 ICLFVLSGASISVLHVNEEEAVGTAET---ASARSIWKDLMIIPIVRDIT 235
:.: |..|.|.........|. |.|.|.|..|.....:|.:.
RBAM_037690__ 79 LGI-------ILFLQVRMCAPAAVRERFLFADAASGWVYLFQQKQLRVLI 121
BSNT_01919___ 236 VMDMIEALAGSVWSSAILLAFTAAVLHETEVWWGMFNASYFIGAIVGSVI 285
|||:||:.||.:|..::.|.:...|||:.|.|||..|..|:.|.::|.:|
RBAM_037690__ 122 VMDVIESWAGMIWIGSVSLTYVHDVLHKGEAWWGYVNGVYYAGTMIGGLI 171
BSNT_01919___ 286 AIRFSSFFERNM-----------GYAIMFSSLVMSALTLLFSFSPVPFLC 324
..:.|..|:.:: |.......|:.||:|.||. .||
RBAM_037690__ 172 IYKLSGKFQHHLIPLMLTGALAYGMFTFIYGLITSAVTALFL-----VLC 216
BSNT_01919___ 325 ALACAAMGPFYQVRDICQETMLQEVIPEQKRIGIMAAKNAILTPWSGVTY 374
|||...:||:.|||:||.:..|:.|:.|:||::|: |.:
RBAM_037690__ 217 ------MGPACVLRDLTQETLLQNITTEKTRVNILAARSAL------VQF 254
BSNT_01919___ 375 SIM------GLVADAAGAKIAFIAAAALYIMTFLIALAQPRLVHYRRENR 418
..| |:::|..|.:..:|.|..|.:::..|..:|.|: :..
RBAM_037690__ 255 IFMFSIIGTGVISDVFGVRFIYIGAGLLLLISAFIGFSQLRM-----KKM 299
BSNT_01919___ 419 VQ--- 420
||
RBAM_037690__ 300 VQSRM 304
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