Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00890 and RBAM_037640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence pep-align/BSNT_00890.1.9828.seq
# -bsequence pep-align/RBAM_037640.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00890-RBAM_037640.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00890-RBAM_037640.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00890
# 2: RBAM_037640
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity: 70/326 (21.5%)
# Similarity: 102/326 (31.3%)
# Gaps: 174/326 (53.4%)
# Score: 376.0
#
#
#=======================================
BSNT_00890 0 -------------------------------------------------- 0
RBAM_037640 1 MSILEKHAALSYSRTTGIWLVLTGAILWGVSGTVAQYLFQHRHFNTEWLT 50
BSNT_00890 0 -------------------------------------------------- 0
RBAM_037640 51 SVRLLVSGALLLGIAYRKEKGRIWAVWKDRRDRIPLLLFGIFGMLGVQYT 100
BSNT_00890 0 -------------------------------------------------- 0
RBAM_037640 101 YFAAIEYGNAAAATVLQYLGPAIITCFLAIRAKRIPSAKELLAVLLAVAG 150
BSNT_00890 1 ---MLTNGSISQLSVPAAAVVWGVLSGFAAAFYTLYAVGLLNKFDSLVVV 47
::|:|::..||:...||.||:.|.||.|||||....||.|:.|.::|
RBAM_037640 151 TFILVTHGNVGSLSISGLAVFWGISSAFALAFYTLQPHRLLKKWGSAIIV 200
BSNT_00890 48 GWAMIIGGFALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFIK 97
||.|:|||.||..|.|||:.:.: .:..|||.|:|:|:|||:|||:.:::
RBAM_037640 201 GWGMLIGGAALSLIRPPWKFEGE-WSFPAYAAIVFIIIFGTLIAFYCYLE 249
BSNT_00890 98 SLESLSPKETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLI 147
||:.||..|||||...|||||....|:||..|||..:|:|...|:....:
RBAM_037640 250 SLKYLSASETSLLACAEPLSAAFLAVIWLHVPFGISEWLGTFLILATIAL 299
BSNT_00890 148 LALNKEPSVQSEKSILKIRNHANRDI 173
|::.|:
RBAM_037640 300 LSIKKK-------------------- 305
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