Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06229 and RBAM_037610

See DNA alignment / Visit BSNT_06229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:41
# Commandline: needle
#    -asequence pep-align/BSNT_06229.1.9828.seq
#    -bsequence pep-align/RBAM_037610___cotF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06229-RBAM_037610___cotF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06229-RBAM_037610___cotF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06229
# 2: RBAM_037610___cotF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:      77/161 (47.8%)
# Similarity:    88/161 (54.7%)
# Gaps:          56/161 (34.8%)
# Score: 377.0
# 
#
#=======================================

BSNT_06229         0 --------------------------------------------------      0
                                                                       
RBAM_037610__      1 MTERRTLAWHETLELHELVAFQANGLVKLKRTERDVSDARLKQLYRFSIH     50

BSNT_06229         1 -----MRELLPFFPQAP-HREDEEEERADNPFYSGDLLGFAKTSVRSYAI     44
                          :||||||||:|| .||||.|||||:.||||.||..||||||:||.
RBAM_037610__     51 SLEQNLRELLPFFPEAPAFREDETEERADSSFYSGGLLILAKTSVRNYAG    100

BSNT_06229        45 AITETATPQLRNVLVKQLNAAIQLHAHVYRYMYQHGYYPSYNLSELLKND     94
                     |||||||||||:|.||.|||||:.|..|:.||.:.|.||:||||||||||
RBAM_037610__    101 AITETATPQLRHVFVKHLNAAIKWHQMVFEYMEERGQYPAYNLSELLKND    150

BSNT_06229        95 VRNANRAISMK    105
                     ||||.:||:||
RBAM_037610__    151 VRNARKAIAMK    161


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