Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06229 and RBAM_037610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:41
# Commandline: needle
# -asequence dna-align/BSNT_06229.1.9828.seq
# -bsequence dna-align/RBAM_037610___cotF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06229-RBAM_037610___cotF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06229-RBAM_037610___cotF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06229
# 2: RBAM_037610___cotF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 229/490 (46.7%)
# Similarity: 229/490 (46.7%)
# Gaps: 176/490 (35.9%)
# Score: 742.5
#
#
#=======================================
BSNT_06229 0 -------------------------------------------------- 0
RBAM_037610__ 1 ATGACTGAGCGGAGAACATTAGCATGGCATGAAACGTTAGAACTGCATGA 50
BSNT_06229 0 -------------------------------------------------- 0
RBAM_037610__ 51 GTTAGTGGCTTTCCAGGCAAACGGACTTGTGAAATTAAAAAGAACAGAGC 100
BSNT_06229 0 -------------------------------------------------- 0
RBAM_037610__ 101 GGGACGTAAGCGATGCCAGATTAAAACAGCTTTACAGATTTTCCATCCAT 150
BSNT_06229 1 ---------------TTGAGAGAGCTTCTTCCGTTCTTTCCACAGGCTCC 35
.||.|.||.||.|||||.|||||.||..|.|||||
RBAM_037610__ 151 TCGCTGGAACAAAATCTGCGTGAACTGCTTCCTTTCTTCCCTGAAGCTCC 200
BSNT_06229 36 GCAC----AGAGAAGATGAGGAAGAAGAACGCGCAGATAACCCATTTTAC 81
|.| .|.||.|||||...||||||.|||||.|||..|.|.||||||
RBAM_037610__ 201 -CGCCTTTCGTGAGGATGAAACAGAAGAGCGCGCTGATTCCTCCTTTTAC 249
BSNT_06229 82 AGCGGTGACCTGCTCGGTT--TTGCTAAAACATCTGTCCGCAGCTATGCC 129
|||||.|.|||||| |.| |.||.||||||||||||||||..||||||
RBAM_037610__ 250 AGCGGCGGCCTGCT--GATCCTGGCCAAAACATCTGTCCGCAATTATGCC 297
BSNT_06229 130 ATCGCAATTACAGAAACAGCAACACCTCAATTAAGAAACGTACTGGTCAA 179
...||.||||||||.||.||.|||||||||||||||.||||..|.|||||
RBAM_037610__ 298 GGAGCCATTACAGAGACGGCCACACCTCAATTAAGACACGTCTTCGTCAA 347
BSNT_06229 180 ACAGCTGAATGCTGCCATCCAGCTGCACGCCCATGTTTATCGA-TACATG 228
.||..|.||.||.||||||.||..||| .|..|||.|..|.|| ||.|||
RBAM_037610__ 348 GCACTTAAACGCGGCCATCAAGTGGCA-TCAAATGGTCTTTGAGTATATG 396
BSNT_06229 229 TATCAGCATGGATATTATCCGTCTTACAACCTTTCTGAACTGTTGAAAAA 278
.|..|.|..||..|.||||||.||||||||||....|||.||.||||.||
RBAM_037610__ 397 GAAGAACGGGGTCAATATCCGGCTTACAACCTGAGCGAATTGCTGAAGAA 446
BSNT_06229 279 CGATGTCAGAAACGCCAACAGAGCCATTTCAATGAAATAA 318
.|||||..|.|||||||..|.||||||..|.|||||||||
RBAM_037610__ 447 TGATGTGCGCAACGCCAGAAAAGCCATCGCGATGAAATAA 486
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