Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06224 and RBAM_037600

See DNA alignment / Visit BSNT_06224 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:41
# Commandline: needle
#    -asequence pep-align/BSNT_06224___yybS.1.9828.seq
#    -bsequence pep-align/RBAM_037600___yybS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06224___yybS-RBAM_037600___yybS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06224___yybS-RBAM_037600___yybS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06224___yybS
# 2: RBAM_037600___yybS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     196/311 (63.0%)
# Similarity:   253/311 (81.4%)
# Gaps:           2/311 ( 0.6%)
# Score: 1066.0
# 
#
#=======================================

BSNT_06224___      1 MKQTRALMEGAILISLFAIITLLVVYVPVIGTILLFALPLPMILYTIRHG     50
                     ||.||||:|||||||:||||:|||||:|::|.|||||||||:||||||||
RBAM_037600__      1 MKNTRALIEGAILISIFAIISLLVVYLPLLGAILLFALPLPIILYTIRHG     50

BSNT_06224___     51 LKLGIWMGAVSLPVVFIVGSFNGLIVAFMSACAGIAMGHFFKRKEPGHAI    100
                     ||.|:|||..||||.||||||.||..||.:||.|||||::||:|:||:|:
RBAM_037600__     51 LKSGVWMGLASLPVSFIVGSFTGLTGAFTAACTGIAMGYYFKKKQPGYAV    100

BSNT_06224___    101 ISGALIYMLSIVFYFVISIQFLGINIIDEAMTQYRQSLDMVETVAKQSGN    150
                     .:||:.|:|..|.:||:||.||.:|::|..|:|.|:||.:.||::||.|.
RBAM_037600__    101 AAGAMAYVLCGVVFFVVSIVFLNMNVVDTTMSQLRESLSLAETMSKQLGY    150

BSNT_06224___    151 AGQFEKQLKLMEEQLGIVQYLFPTAIVMVGVIFSFLSYLIAKPLLRRFSP    200
                     ..||.||:||||.||..|||||||.:|:.|::||||||.:|:||||||||
RBAM_037600__    151 GDQFGKQIKLMESQLSTVQYLFPTVLVLTGIVFSFLSYAMARPLLRRFSP    200

BSNT_06224___    201 DIPNLKPFRELKFPQSVVVLYLIIVMLSFLPLEKGQMLYSIALNGEFILG    250
                     |:|.:|||||||.|||||:||.|:.:|.|||||||.||||::|||.|||.
RBAM_037600__    201 DLPKMKPFRELKLPQSVVILYFIVTILGFLPLEKGHMLYSVSLNGGFILS    250

BSNT_06224___    251 FLIFIQGLSFIFFYCHKKQYPKAAAVIAVILGFVHPVFMAAIRILGVLDM    300
                     .||.||||:||||||.:.:.|||..|:|::||.:.|:.::...:||::|:
RBAM_037600__    251 LLICIQGLAFIFFYCREMEMPKAVPVLAIVLGVLFPLILSVYLLLGIIDI    300

BSNT_06224___    301 GFHIRNKVK--    309
                     ||:|||||.  
RBAM_037600__    301 GFNIRNKVTRN    311


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