Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06222 and RBAM_037580

See DNA alignment / Visit BSNT_06222 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:40
# Commandline: needle
#    -asequence pep-align/BSNT_06222___rplI.1.9828.seq
#    -bsequence pep-align/RBAM_037580___rplI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06222___rplI-RBAM_037580___rplI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06222___rplI-RBAM_037580___rplI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06222___rplI
# 2: RBAM_037580___rplI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     136/149 (91.3%)
# Similarity:   141/149 (94.6%)
# Gaps:           0/149 ( 0.0%)
# Score: 674.0
# 
#
#=======================================

BSNT_06222___      1 MKVIFLQDVKGKGKKGEVKNVADGYAHNFLIKKGLAVEANASNISALNGQ     50
                     |||||||||||||||||:|||||||||||||||||||||||:|||||.||
RBAM_037580__      1 MKVIFLQDVKGKGKKGEMKNVADGYAHNFLIKKGLAVEANATNISALKGQ     50

BSNT_06222___     51 KQKEKKEAIAELEQAKSLKETLEKLTVELSAKSGEGGRLFGSVTSKQITE    100
                     |:|||||||||||:||.||||||:||||||||||||||||||||||||.|
RBAM_037580__     51 KEKEKKEAIAELERAKDLKETLEQLTVELSAKSGEGGRLFGSVTSKQIAE    100

BSNT_06222___    101 QLQKDHNIKVDKRKLELPDGIRALGYTNVPVKLHPEVQAVLKVHVKEEA    149
                     .|||.|.||||||||||.||||.||||||||||||||||||||||||||
RBAM_037580__    101 ALQKTHKIKVDKRKLELQDGIRTLGYTNVPVKLHPEVQAVLKVHVKEEA    149


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