Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04032 and RBAM_037570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_04032.1.9828.seq
# -bsequence pep-align/RBAM_037570.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04032-RBAM_037570.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04032-RBAM_037570.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04032
# 2: RBAM_037570
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity: 56/256 (21.9%)
# Similarity: 96/256 (37.5%)
# Gaps: 76/256 (29.7%)
# Score: 155.5
#
#
#=======================================
BSNT_04032 1 -----------------MLTKAEALAHSVIYRKN-----SRF-------- 20
::| :.|.:::... .||
RBAM_037570 1 MSADGAAQENDEVVSFPIIT----ILHIILHHNEGCVGMKRFFSETYFHN 46
BSNT_04032 21 DKVKEKSEELTLIGKGRSAYVFALTEGGRKMALKVFFPEYRATAVKEAAI 70
.:.|:..|...|||.|:...|:.|| ....:|.||.: .|..||.|.
RBAM_037570 47 PENKKALEHYPLIGDGKDGEVYRLT---YNKCVKYFFDQ--ETCKKELAA 91
BSNT_04032 71 YEKLAGSAFYPDIYETGDSFILMEYIKGETFYNCLKKGIAISDDMIQQVE 120
.:...||...|.:||.||.:|:|||::|.:....:||..::|..:...:.
RBAM_037570 92 LKTGQGSPVIPRLYEYGDRYIVMEYVQGTSLARHIKKEKSLSVKLTADIL 141
BSNT_04032 121 EALSDARAAGLNPSDIHLRNLILTETGAVRVIDVARFEQTKTCTQWDDLK 170
..|.:.:..|....|..:|::::.|.|.::|| |.|
RBAM_037570 142 NMLDELKKIGFTRWDAEIRHILINEYGNLKVI---------------DHK 176
BSNT_04032 171 SAYHALYKKPIFPKKIPGF--------WLEIIAFLYKK---DWFQKHFAQ 209
.|:.|:.:.|: |.:.|. :|..|..|... :| |.|.
RBAM_037570 177 RAFSAITRFPV--KLLKGLDKYGLADEFLNTIKKLNPSRYLEW-QPHM-- 221
BSNT_04032 210 RKRKYS 215
RBAM_037570 221 ------ 221
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