Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04493 and RBAM_037550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence pep-align/BSNT_04493___ytcC.1.9828.seq
# -bsequence pep-align/RBAM_037550.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04493___ytcC-RBAM_037550.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04493___ytcC-RBAM_037550.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04493___ytcC
# 2: RBAM_037550
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity: 94/519 (18.1%)
# Similarity: 165/519 (31.8%)
# Gaps: 192/519 (37.0%)
# Score: 190.0
#
#
#=======================================
BSNT_04493___ 0 -------------------------------------------------- 0
RBAM_037550 1 MNKTFSVPYPYMIQTLDSYYGVKTRPQKQKAIKTQMKHADQIPPVYRKKK 50
BSNT_04493___ 1 ---------------------------------MKLAFICTEKLPAPAV- 16
.|:..|.....|:..|
RBAM_037550 51 KLSILIATFWDYPHTGGLSNYIKTLSEGLKKRGHKVDVISPNLFPSAQVK 100
BSNT_04493___ 17 --RGGAIQMMIDGVTPYFSSRY---------DLTIFSIEDPSLPKRETKD 55
|...:..:.| :|..|| :..:..|.:..|.|
RBAM_037550 101 ELRTAVVPKLKD----FFKDRYGDYNDHILKNNRLMFIYEQMLQK----- 141
BSNT_04493___ 56 GVHYIRLPKEHYREAVAEELRASSFDLIH------------VFNRPLNVS 93
:|..|....|.::.....: ...|:.|: .||| |...
RBAM_037550 142 -IHLERYDVFHAQDLFTANM-LGRFNQIYKKPLFFTPHGMFTFNR-LKFH 188
BSNT_04493___ 94 LYKKASPNSKIVLSLHNEMFSEKKMTFAQGKEVLDNVSMITTVSEFIKQT 143
::||.| |..::.:....|.:.:| ..:..:|:..:..
RBAM_037550 189 IFKKGS-----VEEIYYKTLEMKAIEYA---------DRLIIISDTFRSP 224
BSNT_04493___ 144 VIERFPEAEDITKVVYSGVDLNSYPPVWTMKGSAVRKTYRKKYGIEDKKV 193
:::...|.||:|.|: :|:|.:: |....|||...| :|.:
RBAM_037550 225 LMKLGAEQEDMTTVI-TGIDYDA-------KTGGKRKTPLPK----NKII 262
BSNT_04493___ 194 ILFAGRLSPTKGPHLLIHSMRRILQQHPDAVL-----VIAGGKWFSDDSE 238
|....||.|.||...|:.::.|| |..|| :|||........|
RBAM_037550 263 ISCIARLGPRKGHKYLLDALSRI----PSDVLEHVEVLIAGDGEMRSALE 308
BSNT_04493___ 239 NQYVTYLRTLALPYRDHIIFTKFI-PADDIPNLFLMADVFVCSSQWNEPL 287
.| .|.| ::....|: ..||:|.:..|.|:||..: .|:.|
RBAM_037550 309 EQ----ARKL------NLSMVSFLGKRDDVPAILNMTDIFVLPT-INDSL 347
BSNT_04493___ 288 ARVNYEAMAAGTPLITTNRGGNGEVVKHEVTGLVIDRYNKPSSFAKAIDR 337
.....|||.:|:.:|.|:.||..::::|..|||:::..| ||.:.|
RBAM_037550 348 PISIIEAMFSGSAIIATDCGGIPDLIRHNKTGLIVEPGN-----AKVLAR 392
BSNT_04493___ 338 A----FTDQELMNKMTKNARKHVEALFTFTHAAKRLNTVYQSVLTPKNKQ 383
| .|::........||:.:.|...:.....|.:.::||:..:.:...
RBAM_037550 393 ALAFFITNKSARKIAASNAKAYAEKYLSSETMIKNIESIYQNTNSSEGDH 442
BSNT_04493___ 384 FPPPFLTRNFDLSSINSFL 402
..
RBAM_037550 443 ET----------------- 444
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