Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06218 and RBAM_037500

See DNA alignment / Visit BSNT_06218 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:40
# Commandline: needle
#    -asequence pep-align/BSNT_06218___yycC.1.9828.seq
#    -bsequence pep-align/RBAM_037500___yycC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06218___yycC-RBAM_037500___yycC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06218___yycC-RBAM_037500___yycC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06218___yycC
# 2: RBAM_037500___yycC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 47
# Identity:      38/47 (80.9%)
# Similarity:    44/47 (93.6%)
# Gaps:           1/47 ( 2.1%)
# Score: 194.0
# 
#
#=======================================

BSNT_06218___      1 MRPLQISAETAQKLAESLNLPLEQIMHMPQHILLAKMAELQKEDKS-     46
                     |:|||||||||||||||||:|||:||||||||||||:||:|||:.. 
RBAM_037500__      1 MKPLQISAETAQKLAESLNMPLERIMHMPQHILLAKLAEVQKENDHK     47


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