Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06210 and RBAM_037460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:40
# Commandline: needle
# -asequence pep-align/BSNT_06210___yycE.1.9828.seq
# -bsequence pep-align/RBAM_037460___yycE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06210___yycE-RBAM_037460___yycE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06210___yycE-RBAM_037460___yycE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06210___yycE
# 2: RBAM_037460___yycE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity: 93/141 (66.0%)
# Similarity: 102/141 (72.3%)
# Gaps: 5/141 ( 3.5%)
# Score: 484.0
#
#
#=======================================
BSNT_06210___ 1 -MGKGFSSFHAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSKHNGYDG 49
|...|..|.|||||||||||||.||||||||||.|||:|.||.|.||.|
RBAM_037460__ 1 MMAIEFPQFQAAQIRIARPTGQLKEIIRFYEEGLGLKRVGSFSGHEGYSG 50
BSNT_06210___ 50 VMFGLPHADYHLEFTQYEGGS-TAPVPHPDSLLVFYVPNADELAAITSKL 98
|||||||..||||||:..|.| .|||||.|||||||:.:..|:..|::.|
RBAM_037460__ 51 VMFGLPHTQYHLEFTEETGASQPAPVPHGDSLLVFYIQDQQEVIRISTTL 100
BSNT_06210___ 99 KHMGYQEVESENPYWSNGGVTIEDPDGWRVVFMNSKGISDK 139
|.|||:|...|||||...|||||||||||||.||:.||
RBAM_037460__ 101 KQMGYEEKAPENPYWEEKGVTIEDPDGWRVVLMNTSGI--- 138
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