Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06210 and RBAM_037460

See DNA alignment / Visit BSNT_06210 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:40
# Commandline: needle
#    -asequence pep-align/BSNT_06210___yycE.1.9828.seq
#    -bsequence pep-align/RBAM_037460___yycE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06210___yycE-RBAM_037460___yycE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06210___yycE-RBAM_037460___yycE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06210___yycE
# 2: RBAM_037460___yycE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:      93/141 (66.0%)
# Similarity:   102/141 (72.3%)
# Gaps:           5/141 ( 3.5%)
# Score: 484.0
# 
#
#=======================================

BSNT_06210___      1 -MGKGFSSFHAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSKHNGYDG     49
                      |...|..|.|||||||||||||.||||||||||.|||:|.||.|.||.|
RBAM_037460__      1 MMAIEFPQFQAAQIRIARPTGQLKEIIRFYEEGLGLKRVGSFSGHEGYSG     50

BSNT_06210___     50 VMFGLPHADYHLEFTQYEGGS-TAPVPHPDSLLVFYVPNADELAAITSKL     98
                     |||||||..||||||:..|.| .|||||.|||||||:.:..|:..|::.|
RBAM_037460__     51 VMFGLPHTQYHLEFTEETGASQPAPVPHGDSLLVFYIQDQQEVIRISTTL    100

BSNT_06210___     99 KHMGYQEVESENPYWSNGGVTIEDPDGWRVVFMNSKGISDK    139
                     |.|||:|...|||||...|||||||||||||.||:.||   
RBAM_037460__    101 KQMGYEEKAPENPYWEEKGVTIEDPDGWRVVLMNTSGI---    138


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