Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06210 and RBAM_037460
See
Amino acid alignment /
Visit
BSNT_06210 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:40
# Commandline: needle
# -asequence dna-align/BSNT_06210___yycE.1.9828.seq
# -bsequence dna-align/RBAM_037460___yycE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06210___yycE-RBAM_037460___yycE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06210___yycE-RBAM_037460___yycE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06210___yycE
# 2: RBAM_037460___yycE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 445
# Identity: 287/445 (64.5%)
# Similarity: 287/445 (64.5%)
# Gaps: 53/445 (11.9%)
# Score: 871.0
#
#
#=======================================
BSNT_06210___ 1 ---ATGGGAAAAGGTTTTTCGTCTTTTCACGCAGCACAAATCCGAATTGC 47
||||.||..|..|||.||...|||||.||.||.||||||||.|||||
RBAM_037460__ 1 ATGATGGCAATTGAATTTCCGCAATTTCAAGCGGCGCAAATCCGGATTGC 50
BSNT_06210___ 48 GCGTCCTACGGGCCAGCTTGATGAGATTATTCGTTTTTACGAAGAGGGAC 97
.||.||.||.||.|||||..|.||.||.||..|.|||||.||||||||.|
RBAM_037460__ 51 CCGGCCGACCGGACAGCTCAAAGAAATCATCAGGTTTTATGAAGAGGGCC 100
BSNT_06210___ 98 TGTGTTTGAAACGAATAGG-AGAATTTTCAAAGCATAACGGGTATGACGG 146
|..|..||||..|..|.|| || .|||||....|||.|.||.||...|||
RBAM_037460__ 101 TCGGGCTGAAGAGGGTCGGCAG-TTTTTCCGGACATGAGGGCTACAGCGG 149
BSNT_06210___ 147 TGTCATGTTCGGCCTTCCTCATGCCGATTATCATTTGGAATTCACCCAGT 196
.||||||||||||||.||.|||.|..|.|||||.||.|||||||||
RBAM_037460__ 150 CGTCATGTTCGGCCTGCCCCATACGCAATATCACTTAGAATTCACC---- 195
BSNT_06210___ 197 ATGAAG-----GGGG-----AAGCACTGCCCCCGTTCCACATCCCGACAG 236
|||| ||.| .||| |.||.||||||||.||...||||||
RBAM_037460__ 196 --GAAGAAACCGGCGCGTCTCAGC-CGGCGCCCGTTCCGCACGGCGACAG 242
BSNT_06210___ 237 CCTTCTTGTTTTTTATGTGCCGAATGCA-GATGAACTGGCAGCGAT-CAC 284
|||.|||||.||||| .||.|| |||.|||.||..|..|| |.|
RBAM_037460__ 243 CCTGCTTGTCTTTTA-------CATCCAGGATCAACAGGAGGTCATCCGC 285
BSNT_06210___ 285 TTCAAAGC-------TAAAGCACATGGGCTATCAAGAGGTCGAATCAGAG 327
.|| ||| |||||||.|||||.|||.|.|||...|.|.|.||.
RBAM_037460__ 286 ATC--AGCACGACATTAAAGCAGATGGGATATGAGGAGAAAGCACCCGAA 333
BSNT_06210___ 328 AACCCGTACTGG--AGCAATGGGGGCGTGACGATAGAGGACCCGGATGGC 375
|||||||||||| ||.|| ..||||||||.||.||.||.||.||.|||
RBAM_037460__ 334 AACCCGTACTGGGAAGAAA--AAGGCGTGACCATCGAAGATCCTGACGGC 381
BSNT_06210___ 376 TGGCGGGTCGTTTTTATGAATTCAAAAGGGATATCAGACAAATGA 420
|||||||||||..|.||||||.|||..||.||||.|
RBAM_037460__ 382 TGGCGGGTCGTCCTGATGAATACAAGCGGCATATAA--------- 417
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.