Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06200 and RBAM_037400

See DNA alignment / Visit BSNT_06200 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:39
# Commandline: needle
#    -asequence pep-align/BSNT_06200___yycF.1.9828.seq
#    -bsequence pep-align/RBAM_037400___yycF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06200___yycF-RBAM_037400___yycF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06200___yycF-RBAM_037400___yycF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06200___yycF
# 2: RBAM_037400___yycF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     229/236 (97.0%)
# Similarity:   234/236 (99.2%)
# Gaps:           0/236 ( 0.0%)
# Score: 1196.0
# 
#
#=======================================

BSNT_06200___      1 MMDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDL     50
                     ||||||||||||||||||||||||||||:||||:||||||||||||||||
RBAM_037400__      1 MMDKKILVVDDEKPIADILEFNLRKEGYDVHCAYDGNEAVEMVEELQPDL     50

BSNT_06200___     51 ILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDY    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037400__     51 ILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDY    100

BSNT_06200___    101 VTKPFSTRELLARVKANLRRQLTTAPAEEEPSSNEIHIGSLVIFPDAYVV    150
                     |||||||||||||||||||||||.||||||.:||:|||||||||||||||
RBAM_037400__    101 VTKPFSTRELLARVKANLRRQLTVAPAEEESASNDIHIGSLVIFPDAYVV    150

BSNT_06200___    151 SKRDETIELTHREFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVD    200
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_037400__    151 SKREETIELTHREFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVD    200

BSNT_06200___    201 VTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD    236
                     ||||||||||||||||||||||||||||||||||||
RBAM_037400__    201 VTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD    236


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