Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06200 and RBAM_037400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:39
# Commandline: needle
# -asequence dna-align/BSNT_06200___yycF.1.9828.seq
# -bsequence dna-align/RBAM_037400___yycF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06200___yycF-RBAM_037400___yycF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06200___yycF-RBAM_037400___yycF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06200___yycF
# 2: RBAM_037400___yycF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 711
# Identity: 613/711 (86.2%)
# Similarity: 613/711 (86.2%)
# Gaps: 0/711 ( 0.0%)
# Score: 2673.0
#
#
#=======================================
BSNT_06200___ 1 ATGATGGATAAAAAGATCCTTGTAGTAGATGATGAAAAACCGATTGCAGA 50
|||||||||||.||.|||||||||||.|||||||||||||||||||||||
RBAM_037400__ 1 ATGATGGATAAGAAAATCCTTGTAGTCGATGATGAAAAACCGATTGCAGA 50
BSNT_06200___ 51 TATATTGGAATTTAACTTAAGAAAAGAAGGCTATGAAGTGCACTGTGCCC 100
||||||.||.|||||.||||||||||||||||||||.|||||.|||||..
RBAM_037400__ 51 TATATTAGAGTTTAATTTAAGAAAAGAAGGCTATGACGTGCATTGTGCGT 100
BSNT_06200___ 101 ATGACGGAAACGAAGCCGTTGAAATGGTAGAAGAGCTTCAGCCTGATTTA 150
|.|||||||||||||||||.||||||||.||.||||||||||||||||||
RBAM_037400__ 101 ACGACGGAAACGAAGCCGTGGAAATGGTGGAGGAGCTTCAGCCTGATTTA 150
BSNT_06200___ 151 ATTCTTTTAGATATTATGCTCCCGAATAAAGACGGCGTTGAGGTATGCCG 200
||||||||||||||||||||.||||||||||||||.|||||.||.|||||
RBAM_037400__ 151 ATTCTTTTAGATATTATGCTTCCGAATAAAGACGGAGTTGAAGTGTGCCG 200
BSNT_06200___ 201 TGAAGTCAGAAAGAAATACGATATGCCAATCATTATGCTGACGGCTAAGG 250
.||||||.|.||.|||||.||||||||.||.||||||||||||||.||.|
RBAM_037400__ 201 GGAAGTCCGGAAAAAATATGATATGCCGATTATTATGCTGACGGCAAAAG 250
BSNT_06200___ 251 ATTCAGAAATTGACAAGGTTATCGGGCTCGAAATCGGTGCTGATGACTAT 300
|.||.||.|||||||||||.||||||||.||||||||.||.|||||||||
RBAM_037400__ 251 ACTCGGAGATTGACAAGGTCATCGGGCTTGAAATCGGAGCGGATGACTAT 300
BSNT_06200___ 301 GTCACAAAACCATTCAGCACACGCGAGCTCTTGGCGCGTGTAAAAGCGAA 350
|||||.||.||.||||||||.||.|||||..||||.||.||.||||||||
RBAM_037400__ 301 GTCACGAAGCCTTTCAGCACGCGTGAGCTTCTGGCCCGCGTCAAAGCGAA 350
BSNT_06200___ 351 CCTGCGCCGCCAGCTGACAACAGCGCCTGCGGAGGAAGAGCCTTCCTCTA 400
|||||||||||||||.||....|||||.||.||||||||..|..|.||||
RBAM_037400__ 351 CCTGCGCCGCCAGCTTACGGTTGCGCCGGCTGAGGAAGAATCAGCTTCTA 400
BSNT_06200___ 401 ACGAGATTCATATCGGCTCTCTCGTCATCTTCCCTGACGCGTACGTTGTA 450
|.||.|||||||||||.|||||||||||||||||||||||.||.||.|||
RBAM_037400__ 401 ATGACATTCATATCGGTTCTCTCGTCATCTTCCCTGACGCTTATGTCGTA 450
BSNT_06200___ 451 TCAAAACGAGATGAAACAATCGAATTGACTCATCGTGAGTTCGAATTGCT 500
||||||.||||.|||||.|||||..||||||||||||||||.||||||||
RBAM_037400__ 451 TCAAAAAGAGAAGAAACGATCGAGCTGACTCATCGTGAGTTTGAATTGCT 500
BSNT_06200___ 501 TCATTATTTAGCAAAACATATCGGACAAGTGATGACCCGTGAACATTTGC 550
||||||.|||||.||||||||||||||.||.|||||.|||||.|||.|||
RBAM_037400__ 501 TCATTACTTAGCCAAACATATCGGACAGGTTATGACGCGTGAGCATCTGC 550
BSNT_06200___ 551 TTCAAACCGTTTGGGGCTATGATTACTTCGGCGATGTCAGAACGGTTGAC 600
|.||.||.||.|||||||||||.||.|||||.|||||.||||||||.||.
RBAM_037400__ 551 TGCAGACTGTGTGGGGCTATGACTATTTCGGTGATGTGAGAACGGTGGAT 600
BSNT_06200___ 601 GTAACAGTCCGCCGGCTTCGTGAAAAAATCGAGGACAACCCGAGCCATCC 650
||||||||.|||||.|||||.||.|||||||||||.||.|||||||||||
RBAM_037400__ 601 GTAACAGTGCGCCGCCTTCGCGAGAAAATCGAGGATAATCCGAGCCATCC 650
BSNT_06200___ 651 AAATTGGATCGTCACACGCCGCGGTGTAGGTTATTACTTGAGAAACCCAG 700
.||.||||||||||||.|.||.|||||.||||||||||||||||||||.|
RBAM_037400__ 651 GAACTGGATCGTCACAAGACGGGGTGTCGGTTATTACTTGAGAAACCCTG 700
BSNT_06200___ 701 AACAGGACTAA 711
|||||||||||
RBAM_037400__ 701 AACAGGACTAA 711
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