Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06198 and RBAM_037380

See DNA alignment / Visit BSNT_06198 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:39
# Commandline: needle
#    -asequence pep-align/BSNT_06198___yycH.1.9828.seq
#    -bsequence pep-align/RBAM_037380___yycH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06198___yycH-RBAM_037380___yycH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06198___yycH-RBAM_037380___yycH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06198___yycH
# 2: RBAM_037380___yycH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 455
# Identity:     330/455 (72.5%)
# Similarity:   400/455 (87.9%)
# Gaps:           3/455 ( 0.7%)
# Score: 1814.5
# 
#
#=======================================

BSNT_06198___      1 MKRENIKTILLTVLVVISLVFTWGIWTFQPNFSEGSSSTESTVREKHKIE     50
                     |:||||||::|:||||||||.||||||||||||||::||:|||||||||:
RBAM_037380__      1 MRRENIKTVILSVLVVISLVLTWGIWTFQPNFSEGTASTKSTVREKHKID     50

BSNT_06198___     51 KTTQKLSETVRPRDMFIHDDGAHYKVDDNALYEEIWSDLPHWDVKGIKDI    100
                     ||:||:|:||:|||||||.:|:||||||..|:.::|:|||.|:|||:|||
RBAM_037380__     51 KTSQKVSQTVKPRDMFIHTNGSHYKVDDETLFNDLWADLPQWEVKGMKDI    100

BSNT_06198___    101 SDQYDKAGFKSWFYGIGGSEAKLDLQFSDTIPIDIFQTLFKWSNQSFEYS    150
                     ||||||.|||:|.||..|:.|||||||:||||||.||::|||||.|.|||
RBAM_037380__    101 SDQYDKLGFKNWLYGRNGNSAKLDLQFNDTIPIDFFQSMFKWSNPSMEYS    150

BSNT_06198___    151 SFDHILIPFNETKANKKIYLVSYSKQLILEVTVESANYRNIMNDLKNRQS    200
                     |||||:|||||.|.|||||:||||||||||||||||||||:||:|.:::|
RBAM_037380__    151 SFDHIVIPFNENKTNKKIYMVSYSKQLILEVTVESANYRNLMNELYSKKS    200

BSNT_06198___    201 NMPAFSLFSIGSKKEFLLPNKPLTMDKKEFVTESIKTNTFKQALFSDPSI    250
                     :||.:.|:|:|..||||:||....|.:|||:||:||||.|||.||:|||.
RBAM_037380__    201 SMPLYHLYSVGKSKEFLMPNARFNMKEKEFITETIKTNLFKQTLFNDPST    250

BSNT_06198___    251 VREDSNYNNRNVLTDGISRLDVNLSQRQVQFQQRNLVQSTSYQTGELIKK    300
                     ||||.|| ||||||||||||::|.:|||:|||.|||.||.||||||||||
RBAM_037380__    251 VREDPNY-NRNVLTDGISRLEINSTQRQIQFQHRNLAQSASYQTGELIKK    299

BSNT_06198___    301 SQKYLEDTGSWTDHYQFFNINDSQQLSFYIFMDQIPVINSTAKPFGATSA    350
                     |.|||||||||||||||||::|:||||||:|.||:||||||:||||:...
RBAM_037380__    300 SYKYLEDTGSWTDHYQFFNVSDNQQLSFYMFKDQMPVINSTSKPFGSGPV    349

BSNT_06198___    351 ITVQWANDDILSYKRPNYSLGTNPIKTSETELMSGSEVRMLLSKQTAYDT    400
                     :|:|||||::||||||||.||.|||||.:.::|:|:||..||.:|..||.
RBAM_037380__    350 LTLQWANDEVLSYKRPNYVLGPNPIKTKDVKMMNGNEVVSLLEQQDKYDV    399

BSNT_06198___    401 DKIDQIFLAYQLVSTSTNDDPLVELEPVWAMKVNGKIVPITKDLLRKEGA    450
                     :|||||||:||:||:||||  ||||||||:||:||||||||||||.||..
RBAM_037380__    400 NKIDQIFLSYQMVSSSTND--LVELEPVWSMKINGKIVPITKDLLGKEED    447

BSNT_06198___    451 NSGVE    455
                     ::|||
RBAM_037380__    448 DNGVE    452


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