Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06197 and RBAM_037370

See DNA alignment / Visit BSNT_06197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:39
# Commandline: needle
#    -asequence pep-align/BSNT_06197___yycI.1.9828.seq
#    -bsequence pep-align/RBAM_037370___yycI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06197___yycI-RBAM_037370___yycI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06197___yycI-RBAM_037370___yycI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06197___yycI
# 2: RBAM_037370___yycI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     188/283 (66.4%)
# Similarity:   230/283 (81.3%)
# Gaps:           7/283 ( 2.5%)
# Score: 970.0
# 
#
#=======================================

BSNT_06197___      1 MEWNKTKSIFIVAFLILDIFLGYQFFQKWQATGKEYEVIKN-DVEHDMKA     49
                     |||||||:|||:||||||||||||||:|  .:..||||||| :||.||:.
RBAM_037370__      1 MEWNKTKTIFIIAFLILDIFLGYQFFEK--RSSSEYEVIKNSNVEKDMEM     48

BSNT_06197___     50 DHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVT     99
                     ||||:..|:.::..|||:||.||.|:.|:|:|||||||||:||:||||||
RBAM_037370__     49 DHITFGNLSSDSATGYRLTAGQKVFTAEDIDALKDQKPLMEMPADDHKVT     98

BSNT_06197___    100 SLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFF    149
                     :|||||.:|:.|||:..::||::||||||..|||||||||||.||:|||:
RBAM_037370__     99 TLKMKFTDPVGLSKQKPQEDAESLVSSKITGGEKYKLWKVDKDKKQIIFY    148

BSNT_06197___    150 QTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKES    199
                     |.|:|..|||..|:.::.||||:||||.|||||||:||.||:||:||.||
RBAM_037370__    149 QMYDGQLIYQDFDSSTDAIGQVILHLNDKNEVVSYEQTMLESFKRIQTES    198

BSNT_06197___    200 LITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITV    249
                     ||.|:|||||||.||.||....|||.||||:||||||||||||||||||:
RBAM_037370__    199 LIPELDAVELLYSQNYLKANCAVKSVKFGYIAQYPLTSTQVLAPVWRITI    248

BSNT_06197___    250 EYDKKVNGEKKTVQEYFTVNALESTILDTDQ--    280
                     |  .|..|.||..|:.:||||||||::|.:|  
RBAM_037370__    249 E--DKSKGTKKKTQQTYTVNALESTVIDNNQNK    279


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