Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06195 and RBAM_037350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:39
# Commandline: needle
# -asequence pep-align/BSNT_06195___yyxA.1.9828.seq
# -bsequence pep-align/RBAM_037350___yyxA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06195___yyxA-RBAM_037350___yyxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06195___yyxA-RBAM_037350___yyxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06195___yyxA
# 2: RBAM_037350___yyxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 301/401 (75.1%)
# Similarity: 355/401 (88.5%)
# Gaps: 4/401 ( 1.0%)
# Score: 1575.5
#
#
#=======================================
BSNT_06195___ 1 MVDYEREEEHTTPEQPKRSKKGYFLSSLIGVIVGAVLMAFIMPYLSNEGL 50
:||.|::|....|||:|||:||||||||||||||.||||::||.: |.
RBAM_037350__ 1 -MDYNRDDEQYASEQPRRSKRGYFLSSLIGVIVGAALMAFLLPYWT--GG 47
BSNT_06195___ 51 DTGALDQQQNNN-GRESIRTVNVSVNNAVTKIVSNVSPAVVGVVNIQKSD 99
|.|...:..:.. |.|.::||||:||:|||.:||.||.:||||:||||:|
RBAM_037350__ 48 DHGENSKSTSQRLGSEQVKTVNVNVNDAVTNMVSRVSDSVVGVLNIQKTD 97
BSNT_06195___ 100 IWGESGEAGSGSGVIYKKNDNSAYVVTNHHVIEGASQIEISLKDGSRVSA 149
||||.||||||||||||||.|::|:||||||||||::|||||||||||.|
RBAM_037350__ 98 IWGEGGEAGSGSGVIYKKNGNTSYIVTNHHVIEGATEIEISLKDGSRVPA 147
BSNT_06195___ 150 DLVGSDQLMDLAVLRVKSDKIKAVADFGNSDKVKSGEPVIAIGNPLGLEF 199
:|:|||.|||||||:|||||||:.|.|||||:||.|||||||||||||||
RBAM_037350__ 148 ELIGSDSLMDLAVLKVKSDKIKSAAQFGNSDQVKVGEPVIAIGNPLGLEF 197
BSNT_06195___ 200 AGSVTQGVISGTERAIPVDSNGDGQPDWNAEVLQTDAAINPGNSGGALLN 249
|||||||:|||||||:||||||||||||||||||||||||||||||||::
RBAM_037350__ 198 AGSVTQGIISGTERAVPVDSNGDGQPDWNAEVLQTDAAINPGNSGGALMD 247
BSNT_06195___ 250 MDGKVIGINSMKIAESAVEGIGLSIPSKLVIPVIEDLERYGKVKRPFLGI 299
:.|||:||||||||||||||||||||||||||||:|||:||:|:||||||
RBAM_037350__ 248 ISGKVVGINSMKIAESAVEGIGLSIPSKLVIPVIQDLEKYGEVRRPFLGI 297
BSNT_06195___ 300 EMKSLSDIASYHWDETLKLPKNVTNGVVVMGVDAFSPAGKAGLKELDVIT 349
|||||:|||||||.:||||||.|..|.|:|||||||||||||||:|||||
RBAM_037350__ 298 EMKSLTDIASYHWSQTLKLPKGVKTGAVIMGVDAFSPAGKAGLKKLDVIT 347
BSNT_06195___ 350 EFDGYKVNDIVDLRKRLYQKKVGDRVKVKFYRGGKEKSVDIKLSSADQLG 399
.|||:||||:||||:|||:||:||||.:.|||.||:|:.::||:.||:|.
RBAM_037350__ 348 GFDGHKVNDVVDLRERLYRKKIGDRVNITFYRSGKKKTAEVKLTEADRLQ 397
BSNT_06195___ 400 S 400
.
RBAM_037350__ 398 K 398
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