Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06192 and RBAM_037260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:39
# Commandline: needle
# -asequence pep-align/BSNT_06192___rocR.1.9828.seq
# -bsequence pep-align/RBAM_037260___rocR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06192___rocR-RBAM_037260___rocR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06192___rocR-RBAM_037260___rocR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06192___rocR
# 2: RBAM_037260___rocR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 467
# Identity: 381/467 (81.6%)
# Similarity: 414/467 (88.7%)
# Gaps: 6/467 ( 1.3%)
# Score: 1938.0
#
#
#=======================================
BSNT_06192___ 1 ------MVKDSEFLTLVFQSILDEIDVGLHVVDEHGNTIVYNNKMMQIED 44
:...|||.|||.||||:|||||||||||.|:|::||.|||||||
RBAM_037260__ 1 MRGGIDLHTTSEFYTLVLQSILEEIDVGLHVVDEKGSTVIYNKKMMQIED 50
BSNT_06192___ 45 MEKHDVLNKNLMDVFMFSKQQDSTLVQALQEGKTIKNVKQSYFNNKGQEI 94
|::.|||:|||.||||||.|||||||||||||||||||||||||||||||
RBAM_037260__ 51 MDERDVLHKNLTDVFMFSNQQDSTLVQALQEGKTIKNVKQSYFNNKGQEI 100
BSNT_06192___ 95 TTINHTYPIVQDGKIRGAVEIAKDVTKLERLIRENMNKKGSTTYTFDSIL 144
||||||:||||:|:|:||||||||||||||||||||::|...:|||||||
RBAM_037260__ 101 TTINHTFPIVQNGEIKGAVEIAKDVTKLERLIRENMHRKEQNSYTFDSIL 150
BSNT_06192___ 145 GTSPAIQDVIENAKRATRTSSSVLLAGETGTGKELFAQSIHNGSDRSGGP 194
|.||.|::||||||||||||||||||||||||||||||||||||.|||.|
RBAM_037260__ 151 GNSPVIREVIENAKRATRTSSSVLLAGETGTGKELFAQSIHNGSQRSGAP 200
BSNT_06192___ 195 FISQNCAALPDSLVESILFGTKKGAFTGAVDQPGLFEQAHGGTLLLDEIN 244
|||||||||||||||||||||||||||||:|||||||||.||||||||||
RBAM_037260__ 201 FISQNCAALPDSLVESILFGTKKGAFTGAIDQPGLFEQAQGGTLLLDEIN 250
BSNT_06192___ 245 SLNLSLQAKLLRALQERKIRRIGSTKDTPIDVRIIATMNEDPIDAIAGER 294
||||||||||||||||:|||||||.:|.|||||||||||||||.||:.||
RBAM_037260__ 251 SLNLSLQAKLLRALQEKKIRRIGSAQDKPIDVRIIATMNEDPITAISEER 300
BSNT_06192___ 295 MRKDLYYRLSVVTLIIPPLRERKEDILLLASEFIQKNNHLFQMNVEHISD 344
:||||||||||||||||||||||||||.||..|||||||||||:|:.|||
RBAM_037260__ 301 LRKDLYYRLSVVTLIIPPLRERKEDILPLAEVFIQKNNHLFQMHVDSISD 350
BSNT_06192___ 345 DVKQFFLSYDWPGNIRELEHMIEGAMNFMTDEQTITASHLPYQYRMKIKP 394
||::|||.||||||||||||||||||||||||.||||:||||||||||||
RBAM_037260__ 351 DVQRFFLEYDWPGNIRELEHMIEGAMNFMTDETTITAAHLPYQYRMKIKP 400
BSNT_06192___ 395 ADIPEPETPRHQPAADLKEKMESFEKYVIENVLRKHGHNISKAAQELGIS 444
||.........||..|||:|||:||||:||.:|||||:||||.|.|||||
RBAM_037260__ 401 ADTETKAAASTQPGTDLKDKMENFEKYMIEKILRKHGNNISKTANELGIS 450
BSNT_06192___ 445 RQSLQYRLKKFSHSSNE 461
|||||||||||.....:
RBAM_037260__ 451 RQSLQYRLKKFGLDRMK 467
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