Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06183 and RBAM_037230

See DNA alignment / Visit BSNT_06183 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:38
# Commandline: needle
#    -asequence pep-align/BSNT_06183___rocF.1.9828.seq
#    -bsequence pep-align/RBAM_037230___rocF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06183___rocF-RBAM_037230___rocF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06183___rocF-RBAM_037230___rocF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06183___rocF
# 2: RBAM_037230___rocF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     271/296 (91.6%)
# Similarity:   286/296 (96.6%)
# Gaps:           0/296 ( 0.0%)
# Score: 1413.0
# 
#
#=======================================

BSNT_06183___      1 MDKTISVIGMPMDLGQARRGVDMGPSAIRYAHLIERLSDMGYTVEDLGDI     50
                     |:|.||||||||||||||||||||||||||||||||||||||.|||||||
RBAM_037230__      1 MNKNISVIGMPMDLGQARRGVDMGPSAIRYAHLIERLSDMGYAVEDLGDI     50

BSNT_06183___     51 PINREKIKNDEELKNLNSVLAGNEKLAQKVNKVIEEKKFPLVLGGDHSIA    100
                     |:||||:|||||||||||||:|||:|||||:.|||.::||||||||||||
RBAM_037230__     51 PVNREKLKNDEELKNLNSVLSGNEQLAQKVDSVIENERFPLVLGGDHSIA    100

BSNT_06183___    101 IGTLAGTAKHYDNLGVIWYDAHGDLNTLETSPSGNIHGMPLAVSLGIGHE    150
                     ||||.||||||..|||||||||||||||||||||||||||||||||:||:
RBAM_037230__    101 IGTLTGTAKHYKQLGVIWYDAHGDLNTLETSPSGNIHGMPLAVSLGVGHD    150

BSNT_06183___    151 SLVNLEGYAPKIKPENVVIIGARSLDEGERKYIKESGMKVYTMHEIDRLG    200
                     :||||.||||||||||||||||||||||||:||||:||||||||||||||
RBAM_037230__    151 TLVNLGGYAPKIKPENVVIIGARSLDEGEREYIKETGMKVYTMHEIDRLG    200

BSNT_06183___    201 MTKVIEETLDYLSACDGVHLSLDLDGLDPNDAPGVGTPVVGGISYRESHL    250
                     ||||||||:||||.|||||||||||||||:||||||||||||||||||||
RBAM_037230__    201 MTKVIEETIDYLSDCDGVHLSLDLDGLDPSDAPGVGTPVVGGISYRESHL    250

BSNT_06183___    251 AMEMLYDAGIITSAEFVEVNPILDHKNKTGKTAVELVESLLGKKLL    296
                     ||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_037230__    251 AMEMLYDADIITSAEFVEVNPILDHKNKTGKTAVELVESLLGKKLL    296


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