Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06183 and RBAM_037230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:38
# Commandline: needle
# -asequence dna-align/BSNT_06183___rocF.1.9828.seq
# -bsequence dna-align/RBAM_037230___rocF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06183___rocF-RBAM_037230___rocF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06183___rocF-RBAM_037230___rocF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06183___rocF
# 2: RBAM_037230___rocF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity: 721/894 (80.6%)
# Similarity: 721/894 (80.6%)
# Gaps: 6/894 ( 0.7%)
# Score: 2915.0
#
#
#=======================================
BSNT_06183___ 1 ATGGATAAAACGATTTCGGTTATTGGAATGCCAATGGATTTAGGACAAGC 50
|||.|.||.|..||.||.||||||||||||||.|||||||||||||||||
RBAM_037230__ 1 ATGAACAAGAATATCTCAGTTATTGGAATGCCGATGGATTTAGGACAAGC 50
BSNT_06183___ 51 ACGACGCGGAGTAGATATGGGCCCGAGTGCCATCCGGTACGCTCATCTGA 100
||||||||||||.||.|||||||||||.||||||||.|||||.|||||.|
RBAM_037230__ 51 ACGACGCGGAGTGGACATGGGCCCGAGCGCCATCCGTTACGCGCATCTCA 100
BSNT_06183___ 101 TCGAGCGGCTGTCAGACATGGGGTATACGGTTGAAGATCTCGGTGACATT 150
|.||.|||.|.||.||||||||||||.||||.|||||..|.||.|||||.
RBAM_037230__ 101 TTGAACGGTTATCTGACATGGGGTATGCGGTGGAAGACTTAGGCGACATC 150
BSNT_06183___ 151 CCGATCAACCGCGAAAAAATCAAAAATGACGAGGAACTGAAAAACCTGAA 200
||..||||.||.||||||.||||||||||.||.||.||||||||.|||||
RBAM_037230__ 151 CCCGTCAATCGTGAAAAACTCAAAAATGATGAAGAGCTGAAAAATCTGAA 200
BSNT_06183___ 201 TTCCGTTTTGGCGGGAAATGAAAAACTCGCGCAAAAGGTCAACAAAGTCA 250
.||.||..|..||||.||.||..|.|||||.||||||||..|||..||||
RBAM_037230__ 201 CTCTGTGCTCTCGGGGAACGAGCAGCTCGCCCAAAAGGTGGACAGCGTCA 250
BSNT_06183___ 251 TTGAAGAGAAAAA---ATTCCCGCTTGTCCTGGGCGGTGACCACAGTATT 297
|| |||||..| .|||||.||.|||.|||||||.||.|||||.||.
RBAM_037230__ 251 TT---GAGAATGAGCGGTTCCCTCTCGTCTTGGGCGGCGATCACAGCATC 297
BSNT_06183___ 298 GCGATCGGCACGCTTGCAGGCACAGCGAAGCATTACGATAATCTCGGCGT 347
||||||||.|||||..||||.||.||.|||||.||..|..|.||||||||
RBAM_037230__ 298 GCGATCGGAACGCTGACAGGAACGGCAAAGCACTATAAACAGCTCGGCGT 347
BSNT_06183___ 348 CATCTGGTATGACGCGCACGGCGATTTGAATACACTTGAAACTTCACCAT 397
|||||||||.||||||||||||||.||.||.||.||.|||||.||.||.|
RBAM_037230__ 348 CATCTGGTACGACGCGCACGGCGACTTAAACACGCTGGAAACATCGCCGT 397
BSNT_06183___ 398 CGGGCAATATTCACGGCATGCCGCTCGCGGTCAGCCTCGGCATTGGCCAC 447
|.||||||||||||||.||||||||.||.||||||||||||.|.||.|||
RBAM_037230__ 398 CAGGCAATATTCACGGAATGCCGCTGGCCGTCAGCCTCGGCGTCGGGCAC 447
BSNT_06183___ 448 GAGTCACTGGTTAACCTTGAAGGCTACGCGCCTAAAATCAAACCGGAAAA 497
||..|.|||||.||.||.|..||.||.||.||.||||||||.|||||.||
RBAM_037230__ 448 GACACGCTGGTGAATCTGGGCGGGTATGCCCCGAAAATCAAGCCGGAGAA 497
BSNT_06183___ 498 CGTCGTCATCATTGGCGCCCGGTCACTTGATGAAGGGGAGCGCAAGTACA 547
||||||||||||.|||||..|.||.|||||||||||.|||||..||||||
RBAM_037230__ 498 CGTCGTCATCATCGGCGCGAGATCGCTTGATGAAGGCGAGCGTGAGTACA 547
BSNT_06183___ 548 TTAAGGAAAGCGGCATGAAGGTGTACACAATGCACGAAATCGACCGTCTT 597
|||||||||..|||||||||||.||.||.|||||.||.||.|||||.||.
RBAM_037230__ 548 TTAAGGAAACAGGCATGAAGGTCTATACGATGCATGAGATTGACCGCCTC 597
BSNT_06183___ 598 GGCATGACAAAGGTCATTGAAGAAACCCTTGATTATTTATCAGCATGTGA 647
|||||||||||||||||||||||||||.||||.||.||.||||..|||||
RBAM_037230__ 598 GGCATGACAAAGGTCATTGAAGAAACCATTGACTACTTGTCAGACTGTGA 647
BSNT_06183___ 648 TGGCGTCCATCTGAGCCTTGATCTGGACGGACTTGATCCGAACGACGCAC 697
.|||||.||.||.||||||||.||.|||||.||||||||||.||||||.|
RBAM_037230__ 648 CGGCGTTCACCTCAGCCTTGACCTCGACGGCCTTGATCCGAGCGACGCGC 697
BSNT_06183___ 698 CGGGTGTCGGAACCCCTGTCGTCGGCGGCATCAGCTATCGGGAGAGCCAT 747
|.||.||.||.||.|||||||||||||||||||||||.||.||.||||||
RBAM_037230__ 698 CCGGCGTAGGCACGCCTGTCGTCGGCGGCATCAGCTACCGTGAAAGCCAT 747
BSNT_06183___ 748 TTGGCTATGGAAATGCTGTATGACGCAGGCATCATTACCTCAGCCGAATT 797
|||||.|||||||||||||||||.||.|.||||||.||.|||||.|||||
RBAM_037230__ 748 TTGGCAATGGAAATGCTGTATGATGCCGACATCATCACTTCAGCTGAATT 797
BSNT_06183___ 798 CGTTGAGGTTAACCCGATCCTTGATCACAAAAACAAAACGGGCAAAACAG 847
.||.||.||.|||||||||||.|||||||||||||||||.||||||||||
RBAM_037230__ 798 TGTCGAAGTCAACCCGATCCTCGATCACAAAAACAAAACCGGCAAAACAG 847
BSNT_06183___ 848 CAGTAGAGCTGGTAGAATCTCTGCTAGGGAAGAAGCTGCTGTAA 891
|.||.||||||||.||||||.||.||||.||.||.|||.|.|||
RBAM_037230__ 848 CGGTCGAGCTGGTGGAATCTTTGTTAGGAAAAAAACTGTTATAA 891
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