Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06179 and RBAM_037190

See DNA alignment / Visit BSNT_06179 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:38
# Commandline: needle
#    -asequence pep-align/BSNT_06179___yycO.1.9828.seq
#    -bsequence pep-align/RBAM_037190___yycO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06179___yycO-RBAM_037190___yycO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06179___yycO-RBAM_037190___yycO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06179___yycO
# 2: RBAM_037190___yycO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     180/250 (72.0%)
# Similarity:   209/250 (83.6%)
# Gaps:           6/250 ( 2.4%)
# Score: 931.0
# 
#
#=======================================

BSNT_06179___      1 --MKLKKRVSMFLVALTMC---GGLFVSPAKAVKTTNYAEEIAALQPGTT     45
                       .||.|.|..|.::.||.   .|:.|. ||..:|..||:|||.||.|||
RBAM_037190__      1 MCKKLFKAVLPFALSFTMVLSFSGMNVK-AKETETARYAKEIAELQQGTT     49

BSNT_06179___     46 PEEIMKSASQIAKQQHVKQDVILKQFYKEITADKAEGDRLAKESGMSIMG     95
                     |:::::||.::|||:||..:.|||||::||||||.:|:.:|.:.|:|.||
RBAM_037190__     50 PQDVLQSAKELAKQKHVSTEAILKQFHQEITADKVQGNVIASKEGLSAMG     99

BSNT_06179___     96 GSSGTKKLPTSAKGNIYYTNSYTAYYNHGHVGMYSAADKIVESVPSDGVR    145
                     |||||||||.|.|||||||||||||||||||||||:|||||||||.||||
RBAM_037190__    100 GSSGTKKLPKSTKGNIYYTNSYTAYYNHGHVGMYSSADKIVESVPGDGVR    149

BSNT_06179___    146 QIAYNARDVEDNSIVQTVSVSSSQKTAAADWAVSKVGDPYSFNFVNNRNT    195
                     |||||.|:||||||||||.|:.:||.||||||||:|||.|||||||||||
RBAM_037190__    150 QIAYNGREVEDNSIVQTVKVTDAQKQAAADWAVSRVGDEYSFNFVNNRNT    199

BSNT_06179___    196 GHDGAKNCSKLLWSAFLLKAGIDIDSNGGLGVYPRDITSSSYTTTIMTIN    245
                     ||:||||||||||||||||||||||||||||||||||||||||.||:||:
RBAM_037190__    200 GHEGAKNCSKLLWSAFLLKAGIDIDSNGGLGVYPRDITSSSYTATILTIH    249


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