Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06178 and RBAM_037180
See
DNA alignment /
Visit
BSNT_06178 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:38
# Commandline: needle
# -asequence pep-align/BSNT_06178___yycP.1.9828.seq
# -bsequence pep-align/RBAM_037180___yycP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06178___yycP-RBAM_037180___yycP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06178___yycP-RBAM_037180___yycP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06178___yycP
# 2: RBAM_037180___yycP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity: 229/390 (58.7%)
# Similarity: 287/390 (73.6%)
# Gaps: 8/390 ( 2.1%)
# Score: 1199.5
#
#
#=======================================
BSNT_06178___ 1 MKKWMITIAMLILAGIALFVFIF-----PSHKTVSHQDLRDSGFLDDKEV 45
||| :|.|.::|:|..|:..|.: |:. |:...|.|..||.|||.
RBAM_037180__ 1 MKK-IIWIPLVIIAAAAVLCFFYFRTEDPAE--VARDTLNDPDFLKDKEA 47
BSNT_06178___ 46 LLYFSTSADQDAFGGGKSYALFISQDGSLSSFQMKGLELGSAKVHGDSVM 95
||||||:||||.||||||||||..:.|.|||:.||||||||||||..||:
RBAM_037180__ 48 LLYFSTAADQDTFGGGKSYALFADEKGRLSSYHMKGLELGSAKVHDGSVL 97
BSNT_06178___ 96 LEDKNKIYTIKNGLRSHKRTYQHTGDSAGFLQNTDGFYTLYNSGYDKKGD 145
||||..|||::|||.::||.|||||||||:::...||||||||||||.|.
RBAM_037180__ 98 LEDKKGIYTVQNGLHTYKRAYQHTGDSAGYIERAKGFYTLYNSGYDKSGG 147
BSNT_06178___ 146 GYRSELYRQMNGEWKKDVIPYYIRASGFHKGTIYALVPTTDEKGYQLLQI 195
.||||||||::|.||:||||:|||||||.|..::||.||.|||||.:..|
RBAM_037180__ 148 SYRSELYRQIDGRWKQDVIPHYIRASGFFKDHLFALTPTDDEKGYHVQDI 197
BSNT_06178___ 196 QADQRKLTYHKITEWQYREGASVESQLAVDDQAVYVMVRGQKARNLYQMV 245
|||:.||....|..|.|::|.|||||||.||.||..:.||:||.::||||
RBAM_037180__ 198 QADKEKLHTTSIATWTYKDGTSVESQLAADDSAVCFVTRGEKADHIYQMV 247
BSNT_06178___ 246 KINKKSGKVELHDIDEYKNDEQTIYSSMPFSFKNSFFPYDGNLYFIDGFG 295
|:.:|||.::.:||..|||||||||.|||||||.|||....:.||:||||
RBAM_037180__ 248 KVMRKSGAIKTYDIAAYKNDEQTIYDSMPFSFKKSFFMEQRSFYFVDGFG 297
BSNT_06178___ 296 KVHKIDAKTGKTSIAFTFSQDKMKADFKEITQKGSSLYFFTYTHNKPAYI 345
.|::|:.:||::..||.....:|||||||:|.:...||.|||::.|||.|
RBAM_037180__ 298 TVYRINPETGQSKKAFKLPASRMKADFKELTHQNGKLYLFTYSYKKPAKI 347
BSNT_06178___ 346 EQYSLKTGKKLKEKEIGKVKDVVTPKSHLKLYDFEVMKRF 385
|.:.|||||||.::.|..:|::|||||||||||.:||..|
RBAM_037180__ 348 ESFDLKTGKKLNDRTIPNLKNIVTPKSHLKLYDVQVMGGF 387
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.