Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04814 and RBAM_037050

See DNA alignment / Visit BSNT_04814 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence pep-align/BSNT_04814___pucA.1.9828.seq
#    -bsequence pep-align/RBAM_037050.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04814___pucA-RBAM_037050.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04814___pucA-RBAM_037050.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04814___pucA
# 2: RBAM_037050
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     138/345 (40.0%)
# Similarity:   197/345 (57.1%)
# Gaps:          41/345 (11.9%)
# Score: 631.5
# 
#
#=======================================

BSNT_04814___      1 -------------------MATIVQVEGSAYRKAGASMLFKKNGRRIGLL     31
                                        :||||:.|||||:|.|||||...:..|:|:|
RBAM_037050        1 MDDMHRILDVIANSKKAKVLATIVKTEGSAYKKEGASMLILGDKTRVGML     50

BSNT_04814___     32 SGGCVEEDVFQR---ISALGDQLTPTLIPYDMRSEDDLSWGMGAGCNGMI     78
                     |.||:|||:.:|   :.|.|:   |.::.:||.:|||||||.|.||||::
RBAM_037050       51 SAGCLEEDLVERSEQVWAAGE---PLIVRFDMSAEDDLSWGQGIGCNGVL     97

BSNT_04814___     79 HVHAERITQEKRRHYEKVRDCLHSGKAVTSVTK----IGSSHYLFLTENG    124
                     .|..|.:..|..|:...|:.||...|:||.:.:    :.....|::.|:|
RBAM_037050       98 TVLLEPVKGELERNLMTVKTCLDEKKSVTRMKRFTKTLEPKEDLYIVEDG    147

BSNT_04814___    125 H-FGN---WPDAPLQDIQRTVSTLHLPHFDQTTN--MFIQRIEPKPRLIL    168
                     . ||.   .....:|.:::|...:..   |:.|:  .||.::.|||.|.:
RBAM_037050      148 SVFGTGDVMEQGCIQKLRQTEKGIKR---DEHTSDLFFIHQMVPKPCLYV    194

BSNT_04814___    169 FGAGPDTVPLANLAADTGFSVIVTDWRPAYCTSSLFPKADQLITAFPEQM    218
                     ||||.|..||.:|||.|||.|.|.|||||.|....||:|..|||..||::
RBAM_037050      195 FGAGEDAKPLVSLAAGTGFHVTVIDWRPALCHHGHFPEAGHLITGAPEEV    244

BSNT_04814___    219 LSEFQFFPNDVAVVATHHYQHDQTIINFLFSQNLHYIGLLGSANRTKRLL    268
                     :........|..|:.||.:|.||.|::.|.::|:.|.|:||...||:|||
RBAM_037050      245 MEGLSMTKRDFVVIMTHSFQKDQIILHTLKNENVFYKGVLGPRRRTERLL    294

BSNT_04814___    269 NGKHPPSHFYSPVGLKIGAEGPEEIAVSVVAEIIQ--TRKRIAVV    311
                     .|...|...:||:||.|||:||||||||:|.|:||  .::|.|: 
RBAM_037050      295 GGAEIPEDIHSPIGLPIGAQGPEEIAVSIVGEMIQKMRKQRSAL-    338


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