Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03127 and RBAM_036860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_03127___yocF.1.9828.seq
# -bsequence pep-align/RBAM_036860___yocF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03127___yocF-RBAM_036860___yocF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03127___yocF-RBAM_036860___yocF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03127___yocF
# 2: RBAM_036860___yocF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 379
# Identity: 301/379 (79.4%)
# Similarity: 334/379 (88.1%)
# Gaps: 10/379 ( 2.6%)
# Score: 1523.0
#
#
#=======================================
BSNT_03127___ 1 MIKNHFTFQKLNGITPYIWTIFFILPFYFIWKSSSTFVIIVGIILTLLFF 50
:|.:|.|||||||:||||.||||||||||:||||||||:.|||.||:||
RBAM_036860__ 1 -MKKYFKFQKLNGISPYIWMIFFILPFYFIFKSSSTFVIVAGIIFTLVFF 49
BSNT_03127___ 51 SVYRFAFVSKGWTIYLWGFLLIGISTASITLFSYIYFAFFIAYFIGNIKE 100
..||||||:|||.:|||..|||||||.|..||||||||||||||||:|::
RBAM_036860__ 50 GAYRFAFVAKGWPLYLWALLLIGISTGSAMLFSYIYFAFFIAYFIGHIRD 99
BSNT_03127___ 101 RVPFHILYYVHLISAAVAANFSLVLKKEFFLTQIPFVVITLISAILLPFS 150
:|||:||||:|:||||||.|||||||||:|||||||:|||||||||||.|
RBAM_036860__ 100 KVPFYILYYIHIISAAVAVNFSLVLKKEWFLTQIPFIVITLISAILLPLS 149
BSNT_03127___ 151 IRSRKERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGL 200
|||||.|||||||||.||||||:|||||||||||||||||||||||||||
RBAM_036860__ 150 IRSRKARERLEEKLEYANERIADLVKLEERQRIARDLHDTLGQKLSLIGL 199
BSNT_03127___ 201 KSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDEL 250
||||||||||||||||..||||||||||||||||||||||||||||||||
RBAM_036860__ 200 KSDLARKLIYKDPEQARTELKSVQQTARTSLNEVRKIVSSMKGIRLKDEL 249
BSNT_03127___ 251 INIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQA 300
.|::||||||.|.|:|||::.|::||||||||:|||:|||||||||||.|
RBAM_036860__ 250 GNVRQILEAAGIEFVYEEKEAPKHISLLNENIVSMCIKEAVTNVVKHSGA 299
BSNT_03127___ 301 KTCRVDIQQLWKEVVITVSDDGTFK-GEENSFSKGHGLLGMRERLEFANG 349
|.||:.||||||||||.|.|||:|: .|:..|||||||||||||||||||
RBAM_036860__ 300 KVCRITIQQLWKEVVIMVEDDGSFQCKEDRFFSKGHGLLGMRERLEFANG 349
BSNT_03127___ 350 SLHINTENGTKLTMAIPNNSK-------- 370
||.|:|..||||||.|||:||
RBAM_036860__ 350 SLAIDTAAGTKLTMRIPNDSKSKEKDGSR 378
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