Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06118 and RBAM_036840

See DNA alignment / Visit BSNT_06118 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:36
# Commandline: needle
#    -asequence pep-align/BSNT_06118.1.9828.seq
#    -bsequence pep-align/RBAM_036840___yxbG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06118-RBAM_036840___yxbG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06118-RBAM_036840___yxbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06118
# 2: RBAM_036840___yxbG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     187/273 (68.5%)
# Similarity:   201/273 (73.6%)
# Gaps:          63/273 (23.1%)
# Score: 978.0
# 
#
#=======================================

BSNT_06118         0 --------------------------------------------------      0
                                                                       
RBAM_036840__      1 MGRLTDKTAIITGAATGIGQATARVFADEGARVICGDINESELNETVSAI     50

BSNT_06118         1 -------------MSDENSVKAFADQIKDACGTIDILFNNAGVDQEGGKV     37
                                  :|:|.:||:|||.|:...|||||||||||||||||||
RBAM_036840__     51 RKNGGEAEAFHLDVSNEENVKSFADGIQQKYGTIDILFNNAGVDQEGGKV    100

BSNT_06118        38 HEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLDNGGSIINTSSMSGRAADL     87
                     |||||||||||||||||||||||||||||||:.|||||||||||||||||
RBAM_036840__    101 HEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLEKGGSIINTSSMSGRAADL    150

BSNT_06118        88 DRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTK    137
                     ||||||||||||||||:||||||||:||||||:||||||||||||||||.
RBAM_036840__    151 DRSGYNAAKGGITNLTRAMAIDYARSGIRVNSLSPGTIETPLIDKLAGTT    200

BSNT_06118       138 EQEMGEAFREANKWVTPLGRLGQPKEMATVALFLASDDSSYVTGEDITAD    187
                     |.||||||||||||:|||||||:|:|||.|||||||||||||||||||||
RBAM_036840__    201 EDEMGEAFREANKWITPLGRLGKPEEMAAVALFLASDDSSYVTGEDITAD    250

BSNT_06118       188 GGIMAYTWPGKMLIDEKWKEETK    210
                     |||||||||||||||:||||||:
RBAM_036840__    251 GGIMAYTWPGKMLIDKKWKEETE    273


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