Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06104 and RBAM_036800

See DNA alignment / Visit BSNT_06104 in genome browser / Return to Orthologue table 
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:36
# Commandline: needle
#    -asequence pep-align/BSNT_06104___iolS.1.9828.seq
#    -bsequence pep-align/RBAM_036800___iolS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06104___iolS-RBAM_036800___iolS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06104___iolS-RBAM_036800___iolS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06104___iolS
# 2: RBAM_036800___iolS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     264/310 (85.2%)
# Similarity:   288/310 (92.9%)
# Gaps:           0/310 ( 0.0%)
# Score: 1394.0
# 
#
#=======================================

BSNT_06104___      1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIHNGVT     50
                     |.|..:||:||:|||||||||||||||||||||||||||||||||.:|||
RBAM_036800__      1 MSKVTIGKTDLKVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIKSGVT     50

BSNT_06104___     51 MLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSP    100
                     |||||||||:|||||||||||:|.|||||.|||||||||:|:||||||||
RBAM_036800__     51 MLDTAYIYGVGRSEELIGEVLKECNREDVFIATKAAHRKEGDDFVFDNSP    100

BSNT_06104___    101 EFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIR    150
                     .|||:||::|||||.||||||||||||||||||||||.||||:||.||||
RBAM_036800__    101 AFLKQSVEDSLKRLQTDYIDLFYIHFPDEHTPKDEAVQALNELKKEGKIR    150

BSNT_06104___    151 SIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISF    200
                     |||||||||||||||||||||||:|||||||||||||||||||.||.|||
RBAM_036800__    151 SIGVSNFSLEQLKEANKDGLVDVIQGEYNLLNREAEKTFFPYTTEHGISF    200

BSNT_06104___    201 IPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAP    250
                     |||||||||||||||.|:||||||||||:|.||:||:|||||:|||:|.|
RBAM_036800__    201 IPYFPLVSGLLAGKYDENTTFPEGDLRNDQAHFQGEQFKENIKKVNQLKP    250

BSNT_06104___    251 IAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQE    300
                     ||||||.|..||||||||||||||||||||||||||.||:|.|.:|||.|
RBAM_036800__    251 IAEKHNADTAHIVLAWYLARPEIDILIPGAKRADQLKDNMKAASITLSAE    300

BSNT_06104___    301 DISFIDKLFA    310
                     :|:||||||:
RBAM_036800__    301 EIAFIDKLFS    310


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