Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06104 and RBAM_036800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:36
# Commandline: needle
# -asequence dna-align/BSNT_06104___iolS.1.9828.seq
# -bsequence dna-align/RBAM_036800___iolS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06104___iolS-RBAM_036800___iolS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06104___iolS-RBAM_036800___iolS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06104___iolS
# 2: RBAM_036800___iolS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 944
# Identity: 736/944 (78.0%)
# Similarity: 736/944 (78.0%)
# Gaps: 22/944 ( 2.3%)
# Score: 2820.5
#
#
#=======================================
BSNT_06104___ 1 ATGAAAAAAGCGAAGCTCGGAAAATCAGACTTGCAGGTATTCCCTATCGG 50
||||..||||..|...||||.|||.|.|||.|..|||||||.||.|||||
RBAM_036800__ 1 ATGAGCAAAGTAACAATCGGCAAAACTGACCTAAAGGTATTTCCGATCGG 50
BSNT_06104___ 51 ATTAGGAACAAATGCTGTCGGAGGACATAACCTCTACCCGAACCTGAATG 100
.||.|||||||||||.|||||.|||||.||.|||||.|||||.|||||||
RBAM_036800__ 51 TTTGGGAACAAATGCGGTCGGCGGACACAATCTCTATCCGAATCTGAATG 100
BSNT_06104___ 101 AAGAAACCGGAAAAGAATTGGTGCGCGAGGCGATTCATAATGGCGTGACC 150
|||||||.||||||||||||||.||.||.||||||.|.|..|||||.|||
RBAM_036800__ 101 AAGAAACGGGAAAAGAATTGGTTCGGGAAGCGATTAAAAGCGGCGTTACC 150
BSNT_06104___ 151 ATGTTAGACACCGCTTATATTTACGGGATCGGCCGTTCCGAAGAATTAAT 200
||||||||.|||||.|||||||||||..|.||||||||.|||||||||||
RBAM_036800__ 151 ATGTTAGATACCGCCTATATTTACGGTGTGGGCCGTTCTGAAGAATTAAT 200
BSNT_06104___ 201 TGGTGAAGTGCTGCGTGAATTCAACCGTGAAGATGTTGTCATCGCCACAA 250
.||.||.||||||...||||..|||||.||.|||||..||||||||||||
RBAM_036800__ 201 CGGCGAGGTGCTGAAAGAATGTAACCGCGAGGATGTCTTCATCGCCACAA 250
BSNT_06104___ 251 AAGCCGCTCACAGAAAACAAGGCAATGACTTTGTCTTTGATAATTCACCA 300
|||||||||||||||||.|||||.||||||||||.||.||.||||||||.
RBAM_036800__ 251 AAGCCGCTCACAGAAAAGAAGGCGATGACTTTGTTTTCGACAATTCACCG 300
BSNT_06104___ 301 GAATTTCTAAAAAAATCAGTTGATGAAAGCCTAAAGCGCTTGAATACCGA 350
|..|||.|.|||.||||.||.||.||.|||||.||.|||.||.|.||.||
RBAM_036800__ 301 GCCTTTTTGAAACAATCGGTCGAAGACAGCCTGAAACGCCTGCAGACTGA 350
BSNT_06104___ 351 TTATATTGATTTGTTCTACATTCACTTCCCTGACGAACATACGCCGAAGG 400
|||.||.|||||.||||||||.||.|||||.||.||.||.||||||||||
RBAM_036800__ 351 TTACATCGATTTATTCTACATCCATTTCCCGGATGAGCACACGCCGAAGG 400
BSNT_06104___ 401 ATGAAGCCGTTAACGCATTGAATGAGATGAAGAAAGCCGGAAAAATCCGC 450
|.|||||||||.|.||||||||||||.||||.||||..|||||||||||.
RBAM_036800__ 401 ACGAAGCCGTTCAAGCATTGAATGAGCTGAAAAAAGAAGGAAAAATCCGT 450
BSNT_06104___ 451 TCCATCGGTGTATCCAACTTCTCTTTAGAGCAATTGAAAGAAGCAAACAA 500
||||||||.||||||||.||||||||.||.||..||||||||||.||.||
RBAM_036800__ 451 TCCATCGGCGTATCCAATTTCTCTTTGGAACAGCTGAAAGAAGCCAATAA 500
BSNT_06104___ 501 AGACGGTTTGGTAGATGT-ATTGCAAGGCGAATACAACCTGTTAAACCGT 549
||||||.||.||.||.|| ||| |||||.||||||||||||.|.||||||
RBAM_036800__ 501 AGACGGCTTAGTCGACGTGATT-CAAGGAGAATACAACCTGCTGAACCGT 549
BSNT_06104___ 550 GAAGCGGAAAAAACATTCTTCCCGTATACGAAGGAGCATAACATTTCATT 599
||.||||||||.||.||||||||.|||||||..||.||...|||.|||||
RBAM_036800__ 550 GAGGCGGAAAAGACTTTCTTCCCTTATACGACAGAACACGGCATCTCATT 599
BSNT_06104___ 600 TATCCCTTACTTCCCGCTCGTATCAGGTTTATTGGCAGGAAAGTATAC-- 647
.||.||.|||||||||||||||||.||..|..||||.||.|| ||||
RBAM_036800__ 600 CATTCCGTACTTCCCGCTCGTATCCGGACTGCTGGCCGGCAA--ATACGA 647
BSNT_06104___ 648 --AGAAGATACAACGTTCCCAGAAGGCGACCTGCGAAACGAACAGGAACA 695
||| |.|||||.|||||.||||||||||||||.||.||.||||..||
RBAM_036800__ 648 CGAGA--ACACAACCTTCCCTGAAGGCGACCTGCGCAATGATCAGGCGCA 695
BSNT_06104___ 696 CTT-CAAGGGCGAGC-GTTTCAAAGAAAATATCAGAAAGGTCAACAAGCT 743
.|| |||||| |||| |||| ||||||||.||||.|||.||||||.||||
RBAM_036800__ 696 TTTCCAAGGG-GAGCAGTTT-AAAGAAAACATCAAAAAAGTCAACCAGCT 743
BSNT_06104___ 744 TGCGCCGATTGCCGAAAAACACAACGTGGATATCCCTCACATCGTATTGG 793
....||||||||||||||.|||||.|..||||...|.||.|||||..|.|
RBAM_036800__ 744 CAAACCGATTGCCGAAAAGCACAATGCCGATACGGCGCATATCGTGCTTG 793
BSNT_06104___ 794 CCTGGTATTTAGCAAGACCGGAAATTGATATTTTAATCCCTGGAGCAAAA 843
|||||||.||.||.|||||.|||||.|||||..|.||.||.||.||.|||
RBAM_036800__ 794 CCTGGTACTTGGCGAGACCTGAAATCGATATCCTGATTCCGGGCGCCAAA 843
BSNT_06104___ 844 CGTGCCGATCAGCTGATT----GATAACATTAAAACAGCCGACGTGACGC 889
||.||.||||| ||| ||.|||||.|||.|||||..|.|.||||
RBAM_036800__ 844 CGCGCGGATCA----ATTAAAAGACAACATGAAAGCAGCCTCCATTACGC 889
BSNT_06104___ 890 TTTCTCAAGAAGATATTTCGTTTATTGATAAGCTGTTCGCATAA 933
|.|||...|||||.||..|||||||.||.||||||||..|.|||
RBAM_036800__ 890 TATCTGCTGAAGAAATCGCGTTTATCGACAAGCTGTTTTCCTAA 933
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