Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06103 and RBAM_036790

See DNA alignment / Visit BSNT_06103 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:35
# Commandline: needle
#    -asequence pep-align/BSNT_06103___iolR.1.9828.seq
#    -bsequence pep-align/RBAM_036790___iolR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06103___iolR-RBAM_036790___iolR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06103___iolR-RBAM_036790___iolR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06103___iolR
# 2: RBAM_036790___iolR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     219/251 (87.3%)
# Similarity:   235/251 (93.6%)
# Gaps:           0/251 ( 0.0%)
# Score: 1139.0
# 
#
#=======================================

BSNT_06103___      1 MKLMRIQEMEEYILSHGTVSLDELCQVFNVSKNTVRRDINKLTEKGAIEK     50
                     ||||||||||||||.||..||||||:||||||||||||||||.|||.|:|
RBAM_036790__      1 MKLMRIQEMEEYILKHGATSLDELCEVFNVSKNTVRRDINKLAEKGVIKK     50

BSNT_06103___     51 VYGGVTSIEKTALVPFENRTIQHQDEKTKIAHYASRFIEDHDLVFIDSGT    100
                     |||||||.||:.|||||||||||||||.|||.||||||||||||||||||
RBAM_036790__     51 VYGGVTSAEKSVLVPFENRTIQHQDEKIKIARYASRFIEDHDLVFIDSGT    100

BSNT_06103___    101 TTKSILDTLDPAKNVTILTNSLDIINAASALKNINLIIIGNNYKRKTRSF    150
                     ||||:|:||||.||||:||||||||||||::|||:|||||||||||||||
RBAM_036790__    101 TTKSMLETLDPDKNVTVLTNSLDIINAASSMKNIDLIIIGNNYKRKTRSF    150

BSNT_06103___    151 VGMDDPAMLDKYNINKAFMSATGTTLTHGLTNSDLLEYEIKKRISEKAKE    200
                     ||:|||:.|:|||||||||||||||:|||||||||||||:||||||||.|
RBAM_036790__    151 VGIDDPSTLNKYNINKAFMSATGTTITHGLTNSDLLEYEVKKRISEKANE    200

BSNT_06103___    201 VYLLADHSKFGKSTLLTYAPFDRLHCIVTSQPLDDEYTQYCNEHQIGIHL    250
                     |||||||||||||||||||||||||.|||||.||:|||:||.||||.|||
RBAM_036790__    201 VYLLADHSKFGKSTLLTYAPFDRLHSIVTSQQLDEEYTKYCQEHQIDIHL    250

BSNT_06103___    251 A    251
                     |
RBAM_036790__    251 A    251


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