Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06099 and RBAM_036770

See DNA alignment / Visit BSNT_06099 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:35
# Commandline: needle
#    -asequence pep-align/BSNT_06099___iolB.1.9828.seq
#    -bsequence pep-align/RBAM_036770___iolB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06099___iolB-RBAM_036770___iolB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06099___iolB-RBAM_036770___iolB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06099___iolB
# 2: RBAM_036770___iolB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     234/271 (86.3%)
# Similarity:   254/271 (93.7%)
# Gaps:           0/271 ( 0.0%)
# Score: 1272.0
# 
#
#=======================================

BSNT_06099___      1 MSYLLRKPQSHEVSNGVKLVHEVTTSNSDLTYVEFKVLDLASGSSYTEEL     50
                     ||:||||||:.|:|.||.::|:||::||||.||.|||:||..||:|||:|
RBAM_036770__      1 MSHLLRKPQADEISQGVNIIHDVTSANSDLKYVGFKVVDLTPGSAYTEDL     50

BSNT_06099___     51 KKQEICIVAVTGKITVTDHESTFENIGTRESVFERKPTDSVYISNDRAFE    100
                     ||.|.|||||||||||||::.|||:|||||||||||||||||:||||:||
RBAM_036770__     51 KKTECCIVAVTGKITVTDYDQTFESIGTRESVFERKPTDSVYVSNDRSFE    100

BSNT_06099___    101 ITAVSDARVALCYSPSEKQLPTKLIKAEDNGIEHRGQFSNKRTVHNILPD    150
                     |||||.|||||||||||.|||||||||||||:||||:.:|||||||||||
RBAM_036770__    101 ITAVSGARVALCYSPSEHQLPTKLIKAEDNGVEHRGKLANKRTVHNILPD    150

BSNT_06099___    151 SDPSANSLLVVEVYTDSGNWSSYPPHKHDQDNLPEESFLEETYYHELDPG    200
                     ||||||||||||||||||||||||||||||||||.|||||||||||.||.
RBAM_036770__    151 SDPSANSLLVVEVYTDSGNWSSYPPHKHDQDNLPAESFLEETYYHETDPP    200

BSNT_06099___    201 QGFVFQRVYTDDRSIDETMTVENENVVIVPAGYHPVGVPDGYTSYYLNVM    250
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_036770__    201 QGFVFQRVYTDDRSIDETMTAENENVVIVPAGYHPVGVPDGYTSYYLNVM    250

BSNT_06099___    251 AGPTRKWKFYNDPAHEWILER    271
                     |||||||||:|||||||||||
RBAM_036770__    251 AGPTRKWKFHNDPAHEWILER    271


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