Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06099 and RBAM_036770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:35
# Commandline: needle
# -asequence dna-align/BSNT_06099___iolB.1.9828.seq
# -bsequence dna-align/RBAM_036770___iolB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06099___iolB-RBAM_036770___iolB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06099___iolB-RBAM_036770___iolB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06099___iolB
# 2: RBAM_036770___iolB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity: 652/822 (79.3%)
# Similarity: 652/822 (79.3%)
# Gaps: 12/822 ( 1.5%)
# Score: 2517.5
#
#
#=======================================
BSNT_06099___ 1 ATGAGTTATTTGTTGCGTAAGCCGCAGTCGCATGAAGTGTCTAATGGGGT 50
||||||.|||||.||||.||.||||||.|..||||..|.|||.|.||.||
RBAM_036770__ 1 ATGAGTCATTTGCTGCGCAAACCGCAGGCCGATGAGATTTCTCAAGGCGT 50
BSNT_06099___ 51 CAAACTCGTGCACGAAGTAACGACATCCAACTCTGATCTCACTTATGTAG 100
.||..||.|.||.||.||.||..||.||||.||.||.||||..||.||.|
RBAM_036770__ 51 GAACATCATACATGACGTCACTTCAGCCAATTCAGACCTCAAATACGTCG 100
BSNT_06099___ 101 AGTTTAAAGT-GTTAGATCTTGCATCAGGTTCAAGC-TATACAGAAGAAT 148
..|||||||| ||| ||.||..|..|.||||| .|| |||||||||||.|
RBAM_036770__ 101 GATTTAAAGTCGTT-GACCTCACTCCCGGTTC-CGCATATACAGAAGATT 148
BSNT_06099___ 149 TGAAAAA-ACAAGAAAT-CTGTATTGTGGCGGTAACGGGAAAAATTACAG 196
||||||| || |.|.| |||.||.||.|||||||||||||||||.||.|
RBAM_036770__ 149 TGAAAAAGAC--GGAGTGCTGCATCGTTGCGGTAACGGGAAAAATCACCG 196
BSNT_06099___ 197 TGACAGATCATGAGTC-GACTTTTGAGAATATCGGCACGCGTGAAAGCGT 245
|.||.|||.|||| || |||.|||||.|..||||||||.|||||||||||
RBAM_036770__ 197 TCACTGATTATGA-TCAGACATTTGAAAGCATCGGCACCCGTGAAAGCGT 245
BSNT_06099___ 246 ATTTGAACGAAAACCGACAGACAGCGTCTATATATCAAATGACCGTGCAT 295
|||||||.||||||||||.||||||||.|||.|.||.||||||||..|.|
RBAM_036770__ 246 ATTTGAAAGAAAACCGACGGACAGCGTTTATGTGTCCAATGACCGCTCTT 295
BSNT_06099___ 296 TTGAGATCACAGCAGTCAGCGACGCAAGAGTGGCGCTTTGCTATTCTCCA 345
|||||||||||||.|||||||..||.||.||.|||||.|||||||||||.
RBAM_036770__ 296 TTGAGATCACAGCGGTCAGCGGGGCGAGGGTCGCGCTGTGCTATTCTCCG 345
BSNT_06099___ 346 TCGGAAAAGCAGCTTCCGACAAAGCTGATCAAAGCGGAAGACAACGGAAT 395
||.|||.|.||||||||||||||||||||.|||||||||||||||||..|
RBAM_036770__ 346 TCCGAACACCAGCTTCCGACAAAGCTGATTAAAGCGGAAGACAACGGTGT 395
BSNT_06099___ 396 TGAGCATCGCGGGCAA-TTTTCAAACAAACGTACTGTTCATAACATTCTT 444
.||.|||||| ||||| .|..||||||||||.||.||||||||.|||||.
RBAM_036770__ 396 GGAACATCGC-GGCAAGCTGGCAAACAAACGAACCGTTCATAATATTCTC 444
BSNT_06099___ 445 CCGGATTCAGACCCTTCAGCTAACAGTCTATTAGTAGTTGAAGTCTATAC 494
||.||||||||.||.||.||.|||||.||..|.||.||||||||.||.||
RBAM_036770__ 445 CCCGATTCAGATCCATCGGCAAACAGCCTTCTCGTTGTTGAAGTTTACAC 494
BSNT_06099___ 495 AGACAGCGGCAACTGGTCCAGCTACCCGCCTCACAAACATGATCAAGACA 544
.|||||||||||||||||.||||||||||||||.||||||||.|||||||
RBAM_036770__ 495 GGACAGCGGCAACTGGTCGAGCTACCCGCCTCATAAACATGACCAAGACA 544
BSNT_06099___ 545 ACTTGCCGGAAGAATCTTTCTTAGAAGAAACGTACTACCATGAGTTAGAC 594
|..||||||..|||||.||.|||||||||||.||.||||||||....|||
RBAM_036770__ 545 ATCTGCCGGCTGAATCCTTTTTAGAAGAAACCTATTACCATGAAACGGAC 594
BSNT_06099___ 595 CCGGGACAGGGCTTTGTATTTCAGCGCGTATACACAGATGACCGTTCTAT 644
|||...|||||.|||||.||.|||||.||.|||||.||.|||||.||.||
RBAM_036770__ 595 CCGCCGCAGGGGTTTGTCTTCCAGCGTGTGTACACGGACGACCGCTCGAT 644
BSNT_06099___ 645 TGACGAGACAATGACTGTGGAAAATGAAAACGTTGTCATCGTTCCTGCGG 694
|||.|||||.|||||.|..|||||||||||||||||||||||.||.||||
RBAM_036770__ 645 TGATGAGACGATGACCGCAGAAAATGAAAACGTTGTCATCGTGCCGGCGG 694
BSNT_06099___ 695 GATACCACCCGGTAGGCGTTCCGGACGGATACACATCCTACTATTTAAAT 744
|.||.||||||||.||.|||||||||||.||.||.||.|||||..|.|||
RBAM_036770__ 695 GCTATCACCCGGTTGGTGTTCCGGACGGGTATACCTCTTACTACCTGAAT 744
BSNT_06099___ 745 GTCATGGCAGGGCCGACGCGAAAATGGAAGTTTTATAACGACCCGGCGCA 794
||.|||||.||.|||||.|||||||||||||||.||||.||.|||||.||
RBAM_036770__ 745 GTAATGGCGGGACCGACACGAAAATGGAAGTTTCATAATGATCCGGCCCA 794
BSNT_06099___ 795 TGAGTGGATTTTAGAACGCTAA 816
|||.|||||..|.|||||||||
RBAM_036770__ 795 TGAATGGATCCTGGAACGCTAA 816
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