Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06098 and RBAM_036760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:35
# Commandline: needle
# -asequence pep-align/BSNT_06098___iolC.1.9828.seq
# -bsequence pep-align/RBAM_036760___iolC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06098___iolC-RBAM_036760___iolC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06098___iolC-RBAM_036760___iolC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06098___iolC
# 2: RBAM_036760___iolC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity: 290/330 (87.9%)
# Similarity: 307/330 (93.0%)
# Gaps: 5/330 ( 1.5%)
# Score: 1486.0
#
#
#=======================================
BSNT_06098___ 1 MKYTFNEEKAFDIIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIA 50
|||||||||.|||:|||||||||||.||||||||||||||||||||||||
RBAM_036760__ 1 MKYTFNEEKEFDIVAIGRACIDLNAAEYNRPMEETMTFSKYVGGSPANIA 50
BSNT_06098___ 51 IGSAKLGLKAGFIGKIPDDQHGRFIESYMRKTGVDTTQMVVDQDGHKAGL 100
|||||||||||||||||||||||||.|||:..||||:||.||::|.||||
RBAM_036760__ 51 IGSAKLGLKAGFIGKIPDDQHGRFIVSYMQGKGVDTSQMTVDREGRKAGL 100
BSNT_06098___ 101 AFTEILSPEECSILMYRDDVADLYLEPSEVSEDYIANAKMLLVSGTALAK 150
||||||||||||||||||||||||||||||:|.|||||||||||||||||
RBAM_036760__ 101 AFTEILSPEECSILMYRDDVADLYLEPSEVNEGYIANAKMLLVSGTALAK 150
BSNT_06098___ 151 SPSREAVLKAVQYAKKHQVKVVFELDYRPYTWQSSDETAVYYSLVAEQSD 200
|||||||||||..||||.||||||||||||||||::||||||:|||||||
RBAM_036760__ 151 SPSREAVLKAVHIAKKHDVKVVFELDYRPYTWQSAEETAVYYTLVAEQSD 200
BSNT_06098___ 201 IVIGTRDEFDVMENRTGGSNEESVNHLFGHSADLVVIKHGVEGSYAYSKS 250
|||||||||||||||:||.|:|:|.|||.||||||||||||:||||||:|
RBAM_036760__ 201 IVIGTRDEFDVMENRSGGGNDETVRHLFAHSADLVVIKHGVDGSYAYSRS 250
BSNT_06098___ 251 GEVFRAQAYKTKVLKTFGAGDSYASAFIYGLVSGKDIETALKYGSASASI 300
||||||.|||||||||||||||||||||||||||:|||||||||||||||
RBAM_036760__ 251 GEVFRAHAYKTKVLKTFGAGDSYASAFIYGLVSGRDIETALKYGSASASI 300
BSNT_06098___ 301 VVSKHSSSEAMPTAEEIVQLIEAQS----- 325
||||||||||||.|.||::|||||.
RBAM_036760__ 301 VVSKHSSSEAMPAAGEIIELIEAQHSLNGK 330
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