Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06098 and RBAM_036760

See Amino acid alignment / Visit BSNT_06098 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:35
# Commandline: needle
#    -asequence dna-align/BSNT_06098___iolC.1.9828.seq
#    -bsequence dna-align/RBAM_036760___iolC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06098___iolC-RBAM_036760___iolC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06098___iolC-RBAM_036760___iolC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06098___iolC
# 2: RBAM_036760___iolC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 998
# Identity:     776/998 (77.8%)
# Similarity:   776/998 (77.8%)
# Gaps:          25/998 ( 2.5%)
# Score: 3018.0
# 
#
#=======================================

BSNT_06098___      1 ATGAAGTATACATTCAATGAAGAGAAGGCTTTTGACATTATTGCCATCGG     50
                     |||||.||||||||.||||||||.||.|..|||||.|||.|.||.|||||
RBAM_036760__      1 ATGAAATATACATTTAATGAAGAAAAAGAGTTTGATATTGTCGCGATCGG     50

BSNT_06098___     51 CCGGGCATGTATTGACCTGAACGCAGTCGAATACAACCGCCCAATGGAAG    100
                     .||.||.||||||||..|||||||.|..|||||||||||.||.|||||||
RBAM_036760__     51 ACGCGCGTGTATTGATTTGAACGCTGCGGAATACAACCGGCCGATGGAAG    100

BSNT_06098___    101 AGACGATGACATTTTCCAAATACGTCGGCGGTTCACCTGCGAATATCGCG    150
                     |.||||||||.|||||.|||||.||||||||.||.||.||.|||||.|||
RBAM_036760__    101 AAACGATGACGTTTTCTAAATATGTCGGCGGCTCCCCGGCAAATATTGCG    150

BSNT_06098___    151 ATCGGCAGCGCGAAGCTTGGCTTAAAAGCGGGCTTCATCGGCAAAATTCC    200
                     |||||||||||.|||||.||.||||||||.||.||.|||||||||||.||
RBAM_036760__    151 ATCGGCAGCGCCAAGCTCGGATTAAAAGCCGGTTTTATCGGCAAAATCCC    200

BSNT_06098___    201 GGATGACCAGCATGGAAGATTCATAGAGTCCTATAT---GAGAAAGACCG    247
                     |||.||.|||||.||.||||||||.|..||.|||||   |.|||||   |
RBAM_036760__    201 GGACGATCAGCACGGCAGATTCATCGTTTCTTATATGCAGGGAAAG---G    247

BSNT_06098___    248 GCGTTGATACAACACAGATGGTTGTTGATCA-AGATGGACACAAAGCAGG    296
                     ||||||||||..||||.|||...||||| || |||.||.|.||||||.||
RBAM_036760__    248 GCGTTGATACGTCACAAATGACCGTTGA-CAGAGAAGGGCGCAAAGCCGG    296

BSNT_06098___    297 CCTTGCATTTACAGAAATCCTCAGCCCTGAAGAATGCAGCATTTTAATGT    346
                     .||.||.|||||.|||||.|||||.||.|||||.|||||||||.|.||||
RBAM_036760__    297 GCTCGCTTTTACCGAAATTCTCAGTCCCGAAGAGTGCAGCATTCTGATGT    346

BSNT_06098___    347 ATCGCGATGATGTGGCGGATCTTTATCTTGAGCCTTCAGAGGTAAGCGAG    396
                     |.||.|||||.|||||||||.|.|||||||||||.||.||.||.|..||.
RBAM_036760__    347 ACCGGGATGACGTGGCGGATTTGTATCTTGAGCCGTCCGAAGTCAATGAA    396

BSNT_06098___    397 GACTATATCGCAAATGCGAAAATGCTGCTTGTTTCCGGGACAGCGCTCGC    446
                     |.|||.||||||||.||||||||||||||.||.||.||.||.|||||.||
RBAM_036760__    397 GGCTACATCGCAAACGCGAAAATGCTGCTCGTATCAGGCACGGCGCTTGC    446

BSNT_06098___    447 CAAAAGCCCGTCACGGGAAGCGGTGCTAAAAGCTGTTCAATA-CGCGAAG    495
                     .|||||||||||.||.|||||.||..|||||||.||.| ||| |||.||.
RBAM_036760__    447 GAAAAGCCCGTCGCGCGAAGCCGTCTTAAAAGCGGTGC-ATATCGCAAAA    495

BSNT_06098___    496 AAGCATCAGGTTAAAGTGGTGTTCGAACTGGATTACCGTCCGTATACGTG    545
                     ||.|||.|.||.|||||.|||||.||.||.||.||||||||||||||.||
RBAM_036760__    496 AAACATGACGTAAAAGTCGTGTTTGAGCTCGACTACCGTCCGTATACATG    545

BSNT_06098___    546 GCAGTCATCAGATGAAACAGCCGTTTATTATTCTTTGGTTGCCGAGCAGT    595
                     |||.||..||||.|||||||||||.||.||..|..||||.||.||.||.|
RBAM_036760__    546 GCAATCGGCAGAAGAAACAGCCGTGTACTACACGCTGGTGGCGGAACAAT    595

BSNT_06098___    596 CTGATATCGTCATCGGCACACGCGATGAATTTGATGTGATGGAAAACCGC    645
                     |.||||||||||||||.||.||.||.||||||||.||.||||||||||||
RBAM_036760__    596 CCGATATCGTCATCGGTACGCGTGACGAATTTGACGTAATGGAAAACCGC    645

BSNT_06098___    646 ACAGGCGGAAGCAATGAAGAATCCGTCAATCATTTATTTGGCCATTCAGC    695
                     |..||||||.|.||.||.|||.|||||...|||||.||||..||.||.||
RBAM_036760__    646 AGCGGCGGAGGTAACGATGAAACCGTCCGCCATTTGTTTGCGCACTCCGC    695

BSNT_06098___    696 CGACCTCGTTGTCATCAAACACGGCGTCGAAGGCTCTTACGCATACAGCA    745
                     ||||||.||.|||||.||.||||||||.||.||.||.|||||||||||||
RBAM_036760__    696 CGACCTTGTCGTCATTAAGCACGGCGTTGACGGATCATACGCATACAGCA    745

BSNT_06098___    746 AATCCGGCGAGGTATTCCGCGCTCAAGCGTACAAGACAAAAGTGCTGAAA    795
                     .|||.||.||.||.|||||.||.||.||.||.||.|||||.||||||||.
RBAM_036760__    746 GATCGGGAGAAGTTTTCCGGGCGCATGCCTATAAAACAAAGGTGCTGAAG    795

BSNT_06098___    796 ACCTTTGGAGCCGGTGACTCCTATGCGTCAGCCTTTATCTATGGCCTTGT    845
                     |||||.|||||.|||||.|||||||||||||||||.|||||.||.|||||
RBAM_036760__    796 ACCTTCGGAGCGGGTGATTCCTATGCGTCAGCCTTCATCTACGGACTTGT    845

BSNT_06098___    846 CAGCGGAAAAGACATTGAAACGGCATTGAAATACGGCAGTGCTTCCGCTT    895
                     ||||||....||.|||||||||||.||.||||||||.||.||||||||||
RBAM_036760__    846 CAGCGGCCGGGATATTGAAACGGCTTTAAAATACGGGAGCGCTTCCGCTT    895

BSNT_06098___    896 CCATTGTGGTGAGTAAGCATAGTTCGTCAGAAGCGATGCCGACTGCGGAA    945
                     ||||.||.||.||.||.||.||.||.||||||||.||||||.||||.|..
RBAM_036760__    896 CCATCGTCGTCAGCAAACACAGCTCCTCAGAAGCAATGCCGGCTGCCGGT    945

BSNT_06098___    946 GAAATCGTACAGCTTATTGA-----AGCACAGTCATAA----------    978
                     ||||||.|..|.||.|||||     |||||||||.|||          
RBAM_036760__    946 GAAATCATCGAACTGATTGAAGCGCAGCACAGTCTTAACGGTAAATAG    993


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06098 and RBAM_036760

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
